G77596


Basic Information

Item Value
gene id G77596
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 1753684 ~ 1832249 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104654
cacacacacacacacacacacacacacatatatatgccTGTTTATCTCTATGCCTTCACTCCCAAACACTCAATTACCATGATAAAccactttaaaggagaactctggtgtaaaattttagtgattttagtgGAGTAAAATATGATAGAGTACTAACCTATGGTGAACAGCTctctgcagctttctgagatccagcaatTCTGTGCAGTTTCTCTTTcactgcagataaatcgctttttacactgttatccagctcaaagtagctccacacttccttGGTAGATTtaggagagctctgacatttaaaacgaggcattaataactttaaaagtgcacaataacttattaaaaaccttggaaatcttggaaagctgcagaagagcggaggtgagctattcaacaaaagtaagtactttttatcatgtttttctaCACTAAAAGCCACTTTTACACCAACTTTCTCCTTTAAATTCAGCCTTCTCCCCACAACACTGAGGAACAGCTTGTCAGGTCCAGGCAAAGCCAAATCCAATCGACTAATTCAATCATTTATTGATCCATTTATTCTTTTATCATCAACGATTATGTTACGTTACATTCATGAACAGTCTTAGTCTGTACCCGACAAACAGACTCCCAtgaccaatcagaactgatcTTATACAtcactaaaaactgtttaaccCTGAGCACAGAGTTGCTGAATAACAacctgataaaataataaaacatatatgtggtacatattaaaaaaaaaataaaaaaaataaaacagcaaaacataaaaaaagacacaagtttcagtttcatacaAATGGCTATCAAACTTGGTTAATATAGACTGCAACTGATGCTCAGTCCCATTCTCTAAAAAACAGACCATCTTTAATATTTAGCATgtacaacaaaaaataacaaaaaaaagtttctaaaaagtaatttaaaggagaactctggtgtaaaatgtacttttgctgtagcaaaacatgataaaagtacttttaaatttgttgaatagcctacctccgctctcctgcagctttctgagatccagtaatttgtGCAATTTGTCCAAACAGGCTTTTACAATAGaggatatggggcatattttgcccttgcagataaatctctttttcacaccgttattcaggctcagagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104654 True 1159 lncRNA 0.35 2 1753684 1832249

Neighbor

gene id symbol gene type direction distance location
bub1b NA coding downstream 56686 1690210 ~ 1696998 (-)
pak6 pak6,LOC108269614,LOC108430618,LOC100536197,LOC107663165,LOC108237117 coding downstream 72671 1650846 ~ 1681013 (-)
inafm2 inafm2 coding downstream 176341 1574260 ~ 1577343 (-)
LOC103038790 LOC108430634 coding downstream 256341 1481744 ~ 1497343 (-)
LOC107197727 NA coding downstream 287285 1463238 ~ 1466399 (-)
pld4 pld4 coding upstream 29556 1861805 ~ 1875477 (-)
cep170b NA coding upstream 47021 1879270 ~ 1910962 (-)
akt1 akt1 coding upstream 83783 1916032 ~ 1986853 (-)
siva1 siva1 coding upstream 190034 2022283 ~ 2025811 (-)
adssl1 adssl1,LOC107703625,LOC107678758,LOC107571830 coding upstream 198133 2030382 ~ 2041286 (-)
G77586 NA non-coding downstream 103092 1609584 ~ 1650592 (-)
G77442 NA non-coding downstream 180138 1573324 ~ 1573546 (-)
G77440 NA non-coding downstream 189727 1560949 ~ 1563957 (-)
G77435 NA non-coding downstream 201985 1543203 ~ 1551699 (-)
LOC103036887 NA non-coding downstream 233729 1516944 ~ 1519955 (-)
G77619 NA non-coding upstream 81311 1913560 ~ 1922528 (-)
G77626 NA non-coding upstream 106636 1938885 ~ 1941615 (-)
G77630 NA non-coding upstream 175820 2008069 ~ 2027966 (-)
G77641 dnajc17 non-coding upstream 255368 2087617 ~ 2146273 (-)
G77639 NA non-coding upstream 295276 2127525 ~ 2164947 (-)
gpx2 gpx2,LOC102306767,LOC100700650,LOC103363131 other downstream 312383 1438465 ~ 1441301 (-)
LOC103042803 LOC108441829,LOC108269607,LOC103136210 other downstream 322440 1368097 ~ 1431244 (-)
G77362 NA other downstream 479514 1273737 ~ 1274170 (-)
lin52 lin52,LOC107594798 other downstream 1027454 708644 ~ 726230 (-)
ivd ivd,LOC107719458 other downstream 1217637 459202 ~ 536047 (-)
srp14 srp14 other upstream 21395 1853644 ~ 1860409 (-)
LOC111193168 NA other upstream 210710 2042959 ~ 2047241 (-)
gchfr gchfr other upstream 318539 2150788 ~ 2155348 (-)
G77656 NA other upstream 358064 2190313 ~ 2190653 (-)
LOC103029757 LOC108430670,LOC108269994 other upstream 1131775 2964024 ~ 3044763 (-)

Expression


Co-expression Network