G77779


Basic Information

Item Value
gene id G77779
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 3106385 ~ 3106585 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104901
aacattatgggagacataccagagttcaaaagaggacaaattgttggtgcaggtcttgctggagcatctgtgaccaagacagcaagtctttgtgatgcatcaagagccacggtatccagggtaacgtcagcatcataccaccaagaaggaccaaccacatccaacaggattaactgtggacgctgtaagaggaagctgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104901 True 201 lncRNA 0.47 1 3106385 3106585

Neighbor

gene id symbol gene type direction distance location
LOC103025229 acta1,act2,LOC105024319,LOC108430668,LOC102689871 coding downstream 201737 2900144 ~ 2904648 (-)
LOC103024903 LOC108430667 coding downstream 210704 2881109 ~ 2895681 (-)
LOC103025537 LOC108430628,LOC108269477,LOC107745352,LOC107711907 coding downstream 230749 2869496 ~ 2875636 (-)
LOC111193124 LOC108270491,LOC108234815 coding downstream 354129 2673416 ~ 2752256 (-)
LOC103025843 LOC103025843,LOC108430663 coding downstream 600512 2478136 ~ 2505873 (-)
ankrd9 NA coding upstream 195574 3302159 ~ 3303567 (-)
strn3 strn3,LOC106611207,LOC107590905 coding upstream 774734 3881319 ~ 3909337 (-)
hectd1 hectd1,LOC107582380,LOC107733112,LOC107697712,LOC107719534,LOC107694830,LOC100380626 coding upstream 811071 3917656 ~ 3952193 (-)
heatr5a heatr5a,LOC108412624,LOC107697711,LOC107733168 coding upstream 849741 3956326 ~ 3991775 (-)
mis18bp1 NA coding upstream 887975 3994560 ~ 4006610 (-)
G77777 NA non-coding downstream 14757 3000586 ~ 3091628 (-)
G77755 NA non-coding downstream 241736 2863844 ~ 2864649 (-)
G77749 NA non-coding downstream 296619 2713161 ~ 2809766 (-)
G77752 NA non-coding downstream 339087 2767046 ~ 2767298 (-)
G77705 NA non-coding downstream 594047 2501347 ~ 2512338 (-)
G77801 NA non-coding upstream 106344 3212929 ~ 3213153 (-)
G77888 tecpr2 non-coding upstream 164171 3270756 ~ 3284677 (-)
G77891 NA non-coding upstream 189763 3296348 ~ 3297328 (-)
G77894 rcor1,LOC107719500,LOC107590914,LOC107733187 non-coding upstream 203835 3310420 ~ 3318565 (-)
G77902 traf3,LOC107719479,LOC107697656,LOC107590913 non-coding upstream 249945 3356530 ~ 3359703 (-)
LOC103029757 LOC108430670,LOC108269994 other downstream 61622 2964024 ~ 3044763 (-)
G77656 NA other downstream 915732 2190313 ~ 2190653 (-)
gchfr gchfr other downstream 951037 2150788 ~ 2155348 (-)
LOC111193168 NA other downstream 1059144 2042959 ~ 2047241 (-)
srp14 srp14 other downstream 1245976 1853644 ~ 1860409 (-)
bmf bmf other upstream 69213 3175798 ~ 3206686 (-)
G77892 NA other upstream 190997 3297582 ~ 3348989 (-)
prkd1 prkd1,LOC107590910,LOC107719483,LOC107733145 other upstream 538512 3645097 ~ 3714357 (-)
G78023 scfd1 other upstream 727977 3834562 ~ 3840570 (-)
G78083 NA other upstream 938849 4045434 ~ 4206384 (-)

Expression


Co-expression Network