G77705


Basic Information

Item Value
gene id G77705
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 2501347 ~ 2512338 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104806
cgcagtgcaaattgaaaagcgctgcaaaagcacaaaacacatccatcaaaattacaacacaggcgcagcaaatagaaaaacgcgctgcaaatacaaccacaacacaacggaagtgagtcacaacacaacggaattttcccgggggaccttaaaagatgctgtaccagctgtgtacaaaggacagtaagtggcaaacaagcttctgaaaagtaagttatgtttattacctgtgattaccacggctgtgtgcatattattaaaagttctgcttcacaaaacgccttgtttgccacttattgtcctttgtacacatagtgaagtccgagacgttactgaagacgcagcttagctggtacagtatcttttgaggtcccccgggaaaattccgttgtgttgtgactcacttccgttgtgttgtggttgtatttgcagcgctttttttattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104806 True 446 lncRNA 0.43 2 2501347 2512338

Neighbor

gene id symbol gene type direction distance location
acp7 acp7,papl coding downstream 43755 2432155 ~ 2457592 (-)
thbs1 thbs1,LOC108270370,LOC107568499,LOC107687209,LOC107719693,LOC107743901,LOC107678760 coding downstream 169971 2316627 ~ 2331376 (-)
LOC103039711 NA coding downstream 268915 2221508 ~ 2232432 (-)
LOC103030988 NA coding downstream 366912 2129198 ~ 2134435 (-)
LOC111188180 inf2,LOC103357023,LOC104924786 coding downstream 434322 2061458 ~ 2067025 (-)
LOC111193124 LOC108270491,LOC108234815 coding upstream 161078 2673416 ~ 2752256 (-)
LOC103025537 LOC108430628,LOC108269477,LOC107745352,LOC107711907 coding upstream 357158 2869496 ~ 2875636 (-)
LOC103024903 LOC108430667 coding upstream 368771 2881109 ~ 2895681 (-)
LOC103025229 acta1,act2,LOC105024319,LOC108430668,LOC102689871 coding upstream 387806 2900144 ~ 2904648 (-)
ankrd9 NA coding upstream 789821 3302159 ~ 3303567 (-)
G77696 LOC108430664,LOC108269450,LOC107567345,LOC107678748,LOC104954960,LOC107084056 non-coding downstream 23588 2451422 ~ 2477759 (-)
G77695 NA non-coding downstream 32291 2448573 ~ 2469056 (-)
G77684 NA non-coding downstream 108231 2392876 ~ 2393116 (-)
G77683 NA non-coding downstream 141411 2359731 ~ 2359936 (-)
G77655 NA non-coding downstream 315484 2183986 ~ 2185863 (-)
G77749 NA non-coding upstream 200823 2713161 ~ 2809766 (-)
G77752 NA non-coding upstream 254708 2767046 ~ 2767298 (-)
G77755 NA non-coding upstream 351506 2863844 ~ 2864649 (-)
G77777 NA non-coding upstream 488248 3000586 ~ 3091628 (-)
G77779 NA non-coding upstream 594047 3106385 ~ 3106585 (-)
G77656 NA other downstream 310694 2190313 ~ 2190653 (-)
gchfr gchfr other downstream 345999 2150788 ~ 2155348 (-)
LOC111193168 NA other downstream 454106 2042959 ~ 2047241 (-)
srp14 srp14 other downstream 640938 1853644 ~ 1860409 (-)
LOC103034803 ppp1r14d,LOC105908342,LOC107678771,LOC108269636,LOC101077163 other downstream 736816 1714520 ~ 1764531 (-)
LOC103029757 LOC108430670,LOC108269994 other upstream 451686 2964024 ~ 3044763 (-)
bmf bmf other upstream 663460 3175798 ~ 3206686 (-)
G77892 NA other upstream 785244 3297582 ~ 3348989 (-)
prkd1 prkd1,LOC107590910,LOC107719483,LOC107733145 other upstream 1132759 3645097 ~ 3714357 (-)
G78023 scfd1 other upstream 1322224 3834562 ~ 3840570 (-)

Expression


Co-expression Network