G77684


Basic Information

Item Value
gene id G77684
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 2392876 ~ 2393116 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104775
tgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtatgtcccccataatgttgtgtgcattgcaatatttagagcagaactgtgctcttaccctgctaattgaacctccatactcttacagctcttactggtgcaatgtgcaattaatgaagattgatcaccaggctgctccaatttagccatgaaacctaaaatcccacattaaaatgatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko00380 Tryptophan metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU104775 True 241 lncRNA 0.42 1 2392876 2393116

Neighbor

gene id symbol gene type direction distance location
thbs1 thbs1,LOC108270370,LOC107568499,LOC107687209,LOC107719693,LOC107743901,LOC107678760 coding downstream 61500 2316627 ~ 2331376 (-)
LOC103039711 NA coding downstream 160444 2221508 ~ 2232432 (-)
LOC103030988 NA coding downstream 258441 2129198 ~ 2134435 (-)
LOC111188180 inf2,LOC103357023,LOC104924786 coding downstream 325851 2061458 ~ 2067025 (-)
LOC103031516 inf2 coding downstream 331739 2047308 ~ 2061137 (-)
acp7 acp7,papl coding upstream 39039 2432155 ~ 2457592 (-)
LOC103025843 LOC103025843,LOC108430663 coding upstream 85020 2478136 ~ 2505873 (-)
LOC111193124 LOC108270491,LOC108234815 coding upstream 280300 2673416 ~ 2752256 (-)
LOC103025537 LOC108430628,LOC108269477,LOC107745352,LOC107711907 coding upstream 476380 2869496 ~ 2875636 (-)
LOC103024903 LOC108430667 coding upstream 487993 2881109 ~ 2895681 (-)
G77683 NA non-coding downstream 32940 2359731 ~ 2359936 (-)
G77655 NA non-coding downstream 207013 2183986 ~ 2185863 (-)
G77639 NA non-coding downstream 227929 2127525 ~ 2164947 (-)
G77641 dnajc17 non-coding downstream 246603 2087617 ~ 2146273 (-)
G77630 NA non-coding downstream 364910 2008069 ~ 2027966 (-)
G77695 NA non-coding upstream 55457 2448573 ~ 2469056 (-)
G77696 LOC108430664,LOC108269450,LOC107567345,LOC107678748,LOC104954960,LOC107084056 non-coding upstream 58306 2451422 ~ 2477759 (-)
G77705 NA non-coding upstream 108231 2501347 ~ 2512338 (-)
G77749 NA non-coding upstream 320045 2713161 ~ 2809766 (-)
G77752 NA non-coding upstream 373930 2767046 ~ 2767298 (-)
G77656 NA other downstream 202223 2190313 ~ 2190653 (-)
gchfr gchfr other downstream 237528 2150788 ~ 2155348 (-)
LOC111193168 NA other downstream 345635 2042959 ~ 2047241 (-)
srp14 srp14 other downstream 532467 1853644 ~ 1860409 (-)
LOC103034803 ppp1r14d,LOC105908342,LOC107678771,LOC108269636,LOC101077163 other downstream 628345 1714520 ~ 1764531 (-)
LOC103029757 LOC108430670,LOC108269994 other upstream 570908 2964024 ~ 3044763 (-)
bmf bmf other upstream 782682 3175798 ~ 3206686 (-)
G77892 NA other upstream 904466 3297582 ~ 3348989 (-)
prkd1 prkd1,LOC107590910,LOC107719483,LOC107733145 other upstream 1251981 3645097 ~ 3714357 (-)
G78023 scfd1 other upstream 1441446 3834562 ~ 3840570 (-)

Expression


Co-expression Network