G86205 (ston2)


Basic Information

Item Value
gene id G86205
gene name ston2
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 36434710 ~ 36454220 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU116023
CTGTAACAAGCGTTTAACAACCTGCCACAATAAAGCCTTACCTGAGTTTTTGTCCGGCAGTCGGCTAATCCTCCACACCACAGATTTAAAGGCCTGTTCATACTTGGCAGTTCCCAGAGTGACCCTCATGGCGGGTTCTGAGCCGGAACTGCTCGTAGTCCCGAAGCTGGCTCCTTTATTGAAGCGAGCCTTAAGGGACTTCTCTCCGGTGACACTCTCCCTGCGGAAGTTCTTGGCCCATATTTCAGGTAGCGGGTAACGGACAGCTACGTTTTCACACGGTATAAGTGTGAGAGGGTCTCTGTTGGACGAGAAGCCGGTCGACATCACCAGCCAGGACTGGAGCTCCACCTCTGCACCACGAATGCTGACAACCGTTCTCACGGTGAAGGGAAGCGTCTTTTCCGCGTAGGTTGTTCTGAATCGCAGCAGCTCGAATCGACGTCCAGACGGAGGATCAAAAGCGATGATCCTGGATTCGTCAAATTCCGACTGATCCCCACACTCGTTGAGCCTACAGTCCTGCAAGCGTATCCAGCGTGTGGTGGTGTTTGGAACGATGTCATGACGGGATACCACCTCTTTTCCTCTGACCTGGACGTCGTTGAGTCCGATGTGACATATCGGTGAGCCCGTCAGGAACGCAAGAACATTGACTTGGGTCGTAACCAGGTGTTCTAGAATACGACTATCACCTTTCGACAGGACCCCATAAAAACTATCGATCACTTCTACCTGAATCTCTTCTTCAGAGTAGGACGCAGGTGAACTGATGGACTCTGGGTCTGCAGACAGGTTGGCCAGCTTTTCTTGCAAAGCATACCTGAAGCTTTGGAAGTCCTGGTATTCGACAGTCCCAAGCTTGACCAGTTGCTCCTTGACAGGCATGTGAACCACGGTCACTTTGGGCTGGATCTTACGCTTCTCTTTGTACACCACGTGGTCCAAGCTGAGGGTGTGAACTCGCCCGTTCTCTTCATAGTTCTGCAGCCTGGGTTCAGAAACCTCGAGCTGAGTGTTTAGCTGGAACTCCTTGAAGGGTTTCTCCAGGCCCTTTTCGTAGAAAAGCTGCAGACTGCCAGCATCACTCAGCCTGACGAAGATGGGTCCCCAGTGCCGAGAGgacatgatgttctttttctccgGGATGCGGAGAAGCATGGGCCAGCCATTCTGGGGAGCCATGTGAGATGGTTCATACGGTGTCGCCTCTTCGTCCCCTGTGTCCAAAGAATCGTCTGGTAAAGTGGGACTGCCGACTTGGTCAGGGTCAGAGATCTGCATGTTTTTGAGCTGATCCAGGTCATCTCCAGGAGGACCTGAGGGGAAGAAGTCCTGGCCACCGGTGCTAGACTCACTATCAGGGCTGAAGAGCAGCAAGGATTCCCGTTTGATGTCAGAAGGATTGGGTTCAAAGACAGGGGAACTGAAGGAAAAAGATTTGGGAGTGGCTGAGCCATTGCTTTCAGTGGATTTTAACTCAGTCTTGTTAAAGTAGGCACTGAAAGGGTTGATTGGCGAAGGCTGAACGTTAGAAAACTCATCATCCAGGAAGGGGTTCTTCTTGGTGTAAGGAGTGGTGTTGTTCAGCAGTGGGCTGTCTAATGTAAATGCTGGGTGTGTGCTATCGGGGGTTAAGTCCAGGATGTGCCTGTCGGTACTGGTTCTGTTCTGGATGGGTGAAACTATCAGGTTGCTGTTGGCATCTTGTAACGGAGAGTTGTTGAGGTTGTCAAGCGCGATGTTGGATGGTTTCGGAGCATATTTGTAGTCTGTCGCctcgtcatcatcatcaaacGTTACCCAGCTGGCGAATCGGCCGGGTAGCGTACTGTTGGCGTACTGCTGGCCGTTGGTGTGTGGGTTCTTGGCTGTCCAGTTAAGTGTATCCATGTTTATTCCTTCATCGTCTTGGCAAACAGACGAATCTGCAAagcTGGGTGAATGTGGGCGGGAGGTGGTCTGGCTGGGCGGCTCCTCTGTGGTGAGCGAGGGCAGGTCACTGGAGGACGCCCCCACGCTCATTGAACTGCGCTCCTCAGATTCAGGCACCGCACTCCAGAAAC

Function

symbol description
ston2 Predicted to enable clathrin adaptor activity. Predicted to be involved in regulation of endocytosis and synaptic vesicle endocytosis. Predicted to act upstream of or within endocytosis and synaptic vesicle recycling. Predicted to be located in cytoplasm. Predicted to be active in clathrin-coated vesicle and synaptic vesicle. Orthologous to human STON2 (stonin 2).

NR:

description
PREDICTED: stonin-2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116023 True 2066 lncRNA 0.52 2 36434710 36454220

Neighbor

gene id symbol gene type direction distance location
tdp1 tdp1 coding downstream 389600 35969637 ~ 36045110 (-)
kcnk13 kcnk13,LOC107680770,LOC107588297,LOC107751801,LOC107755770,LOC107693081 coding downstream 499814 35921481 ~ 35934896 (-)
LOC103039887 LOC108437743 coding downstream 522865 35891077 ~ 35911845 (-)
LOC103031708 LOC103031708 coding downstream 716498 35694549 ~ 35718212 (-)
LOC103042065 LOC108437746 coding downstream 801955 35607086 ~ 35632755 (-)
adck1 adck1,LOC107740534,LOC107680795,LOC107751735,LOC107676278 coding upstream 690277 37144497 ~ 37395219 (-)
slirp slirp coding upstream 946368 37400588 ~ 37403021 (-)
hhipl1 hhipl1,LOC107740569,LOC107668615,LOC107680789,LOC107588281 coding upstream 1147188 37601408 ~ 37617010 (-)
vrk1 vrk1,LOC106602366 coding upstream 2210905 38665125 ~ 38698331 (-)
LOC111193258 NA coding upstream 2317808 38772028 ~ 38781288 (-)
G86203 NA non-coding downstream 31989 36402512 ~ 36402721 (-)
G86121 NA non-coding downstream 270458 36162532 ~ 36164252 (-)
G86032 NA non-coding downstream 531237 35903069 ~ 35903473 (-)
G86022 NA non-coding downstream 546996 35879400 ~ 35887714 (-)
G86027 kif13b,kif13ba,LOC108437739 non-coding downstream 577602 35853638 ~ 35857108 (-)
G86210 NA non-coding upstream 17697 36471917 ~ 36474032 (-)
G86211 NA non-coding upstream 19851 36474071 ~ 36476268 (-)
G86212 NA non-coding upstream 23441 36477661 ~ 36478630 (-)
G86246 NA non-coding upstream 662780 37117000 ~ 37117209 (-)
G86294 alkbh1 non-coding upstream 951356 37405576 ~ 37409705 (-)
G85902 tfb1m other downstream 1139676 35288232 ~ 35295034 (-)
daam2 daam2 other downstream 1963105 34274391 ~ 34471605 (-)
rbks rbks,LOC107553733,LOC107656748 other downstream 2422148 33955195 ~ 34012562 (-)
G85618 slc4a1ap other downstream 2595081 33834012 ~ 33839629 (-)
G85550 NA other downstream 2916039 33509680 ~ 33518671 (-)
nrxn3 nrxn3,LOC107755774,LOC107583487 other upstream 134684 36588904 ~ 37101581 (-)
G86432 NA other upstream 1528654 37982874 ~ 38069052 (-)
dicer1 dicer1,LOC107552827,LOC107671118,LOC107668604 other upstream 3353910 39808130 ~ 39858569 (-)
LOC111193261 NA other upstream 4079148 40533368 ~ 40536334 (-)
LOC103044865 NA other upstream 4308452 40762672 ~ 40770501 (-)

Expression


Co-expression Network