G87360


Basic Information

Item Value
gene id G87360
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 41397757 ~ 41503593 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU117673
tgctatttataggtttatgtttgagtaaaatgaacattgttgttttattctataaactacagacaacatttctcccaaattccaaataaaaatattatagtcatttagagcatttatttacagaaaatgagaacaaataatgcaaaaaaaacaagttcatattcataaagttttaagagttcagaaataatcaatatttggtggaataaccctgttttttatgcatcttgtcatcatgttctcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117673 True 245 lncRNA 0.26 2 41397757 41503593

Neighbor

gene id symbol gene type direction distance location
rtraf cunh14orf166,zgc:56576,LOC107693089,LOC107583671,LOC107751811,LOC107680004,LOC107725214 coding downstream 38295 41348855 ~ 41359462 (-)
LOC103035710 NA coding downstream 145329 41233845 ~ 41252428 (-)
gpr137c gpr137c coding downstream 246485 41107720 ~ 41151272 (-)
wdhd1 wdhd1,LOC107583614 coding downstream 314149 41026870 ~ 41083608 (-)
gch1 gch1,LOC107693131,LOC107723641,LOC107564951,LOC107583460,LOC107751761,LOC107680005 coding downstream 374111 40994368 ~ 41023646 (-)
gpr135 gpr135,LOC107679990,LOC107568507,LOC107564991,LOC107693091 coding upstream 253139 41756732 ~ 41759087 (-)
LOC103028306 lrfn5,LOC108443922,LOC107682216,LOC107572671 coding upstream 1005529 42509122 ~ 42655749 (-)
G87343 nid2,wu:fb77a09,LOC107564977,LOC107680002 non-coding downstream 70261 41315760 ~ 41327496 (-)
G87304 NA non-coding downstream 193928 41139566 ~ 41203829 (-)
G87303 NA non-coding downstream 203575 41192136 ~ 41194182 (-)
G87307 NA non-coding downstream 249790 41147486 ~ 41147967 (-)
G87305 NA non-coding downstream 257904 41137867 ~ 41139853 (-)
G87391 NA non-coding upstream 43130 41546723 ~ 41547655 (-)
G87410 NA non-coding upstream 102236 41605829 ~ 41609756 (-)
G87414 NA non-coding upstream 118290 41621883 ~ 41700875 (-)
G87423 NA non-coding upstream 173040 41676633 ~ 41678919 (-)
G87432 NA non-coding upstream 212163 41715756 ~ 41739327 (-)
LOC103044865 NA other downstream 627256 40762672 ~ 40770501 (-)
LOC111193261 NA other downstream 861423 40533368 ~ 40536334 (-)
dicer1 dicer1,LOC107552827,LOC107671118,LOC107668604 other downstream 1539188 39808130 ~ 39858569 (-)
G86432 NA other downstream 3328705 37982874 ~ 38069052 (-)
nrxn3 nrxn3,LOC107755774,LOC107583487 other downstream 4296176 36588904 ~ 37101581 (-)
LOC103040189 NA other upstream 269474 41773067 ~ 41804888 (-)

Expression


Co-expression Network