LOC103035710


Basic Information

Item Value
gene id LOC103035710
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 41233845 ~ 41252428 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007241976.3
AAACAATAGCAAAAAAACTAGAAATTGACAAAAATAGAGTTGCACGTTTTTCATTAGGTAGCAGAAATATAATATGAGCTCTTGAGCTTCTTGTATACAGTAACTCAGGCAGTCAGTAGTGAGTGGGCTGAAGCTCCTTCCTTTCCTCCGAGCTGATTCAGACTGGGTGAGGTAAGAGAGGGGGTGTGTACACTCTGCAGCTCCACCAACACCGGCTCAGAGTCATGAAGCAGAacgagagaacagagagagagagagagagagaaagagacacactgagaaagagaaagactgaAGACCTACTGAGTTTCATCAAAGCTATGGACCAAACAACATGTGGATGGATCTTCTCTTGGACGTACCATCTTCACAGATTCTTGAGGGCTTTTTATAGCCATCAATTCGGGTTCTTGAGGGCTCCTGAGACTTTCTGAAGCTTAATTGTTTTGTAAtaaagagggaaaagagagaaggCTTCTTAAAGTCACGTTGAGAGACACTTTGGAGACATTGGGGACTTTGGTGACTTTAAACACTTTGGAGACTTTGGAGACTTTAGAGATGTTGGGGACTTTGGAGACTTCAGTTAACTTTAGAAGAGGctccaaataaagaaaaaaaagagaaaaggcttCTTAAAGTCACGTTGAGGAACATTTTGGAGACTTTGTTGACTTTGGAGACATTAGGGACTTTGGAGACTTCTGTTAACTTAGGAAGAGTCTATAAAGCAGTCTAAAGAGTCTccaaataaagagataaaagaggCTTCTTAAAGTCACGTTGAGGAACCTTTTGAAGACTTTGGGGACTTTGGAAGCGTCTCCAAAGCAGAGCGATGGACAACGGCATCACCTGGTACCGAGGTGCCACAGTGGAGCCAGAAGGTGGGAGCCCAGAGGTCAGCGCCCTCATGTTTGTCGCTGGCGTTCTAGGCAACGTTCTGGCATTAGTCGTTCTGGAGCTTCGGAGAAGACGGCggcactgcaccttgtttcggGTTCTAGTCACGGCACTTGTGGTGACCGACCTGGCTGGTACTTGCATGATCAGCCCGTTGGTTCAGGTGGCTCACGCTCTGAACACTTCGCTAGTGGGCATGGGGGGCATGAAGAACAATGGAACAGGTCCAGTTTGTGCCTACTTTGGCTTCACTATGACTTTCTTCAGCTTGAGTACTCTTGCGTTGCTGCTGGCCATGACCCTGGAGCGTTGCATAGCCATCGCCTGGCCCTACCAGTACGGGCGACGGGTGAACATCCGGTACGGTCTGGTTGCTGTGCCCACCGTCTACGCACTGTCTGCAGCTTTCTGCGCCCTGCCCTTCGCTGGTTTCGGCGGTTACGTGCAGTACCAACCGGGGACGTGGTGCTTCATCAACATGAACCCGCAAGACCACGAGCACGAGGACAAGGTGTTCGCCAACGTCTACGCCACGCTCATGCTGGCCATGGTGCTGATGGTGGTGGCGTGCAACTGCTTGGTGGCGTACCACCTGGTGCTGATGTACCGCCGGCGTTCCGGGACCAGGGGGTGCACCGTGGTTTGTGGGAAGAAGGACAGGAGGCACTACTCCTTGGCGGAGGAAGTGGAGCACCTCATCCTGCTGGTCTTCATGACCGTCATATTCGTCATATGTTCCCTACCGCTCATGATCCGAGTTTACATCAACTCCACCGATAAGATGAAGAAGAACCACAAGGCGGATCTGGATGCTCTTCGCTACATGTCTGTAAACTCCATCATCGACCCCTGGGCCTTCATCATCCTCAGCCCGTCGGTGCTGCGCTTCTTCTGGGGGGCGCTGTGCAAGGCCAGCGACCGGGGCGCCTCCTACAGGACCTCTCTGGCCAAGGGCTCAGGACATCCGCTGGAGCTGTGTCAGAATAACGCCATATCCACGGACATCACCCACTTTAACAAGTCTGCGCAGATGTTATGACCCTCTGAGCCTCTGGAAGAGCGGTCCAGATAATAAACTCTGATCCAGACCCTGATCTTCACCTCCGAGAGACTCCCACATTCTCCTCCATGCTGAATTAAGACGTCCTCTGCACTGCTGTACAGCAAGGAGGGGGATCTGCGGTGTTTGTTTTCAGAGAGCTAATTTAGAATCCCCCCAGAGCCGGCTCGTTTTGATTGGCGGAGAGATATGAACTCTGGGGGTCCTCGAGGTCAAGCGATGTTTATGTTCCTCAGAACTACTAAAGTCAATGTTTTTGGGAGCGAGAGCATGCTGACCTCTGAAggatttgtgaaaaaaagtctTTACTGAACTCACGCAACCTGAGGAGCGTTGCAGATGCATGTTTGGAGGACGACATGTAGGAAGAACACCTTTGAGATGCTCTGAGAAGTTTTGAGAAAGCTTTGAGGAGTTCTAAGAACTTTGCGAAGCTTTGAATAAACATTAAAAGTGTTGAAAAACTTTGAGAAAAAGTTGAGAAGTGTTGAGAAGCTTCCAGAAGTTCTGAGAAAGCTCTGATAAGCTCTAAGAAATCTCTGAGAAGCTTTAAGGAGCTTTGAGCAGCTCTGAGAAGCTTTGTGAAGCTTTGAGATGTTCTGATAAGTTATGAGATGCTCTGAGAAGCTCTGAGAAGTTCTAAGAAGCTCTGAGAAGTTCTGAGAAAGCTTTGAGAAGTTCTGAGAAATTCTGAGAAAAGCTCTGAGAAGATTTGAGAAGTTCTAAGAAAGCTTTGAGAAGCTCTGGAAAATCTGGTTTGTTCTGAGAAGCTTTGAGAAGTTCTGATGAAGCTTCTAGAAGCTCTGATATGTTTTAACAAGCTTTGAGAAGCTATGAGAAGCCCTGAAAAGCAGTGAAAATCTCTGAGACGTTCTGAGAAAGCTTTGTGAAACTTTCAGAATGCTCTGAGAAGCTTGGAGGAGCTTTCAGAAGCACTGAGATGTTCTGAGAAGCTCTGAGAAGTTCTGAGAAAGCTGTGATTAGCTTTAAGAAGTGTTAAAAAGCTTTGAGAAGCTTTGAGATGCTTTGAGAGGTTCTGAGAAGAGTTGAGAAGCTATGAGAAGCTTTAAGAAATTCTGGGACGTTCTGAGAAGCTTTAAGAAGCTCTGAAAAGTTCTGAGAAGCTCTGAGATGTTCTGAGAAGCATTAAGAAGCTCAGAGAAAGCTCTGAGAAGCTTTAAGCAGCTCGGATGAGCTTTGAGAAGCTCAGAGAAAGCTCTAAGATGCTCTGGAAAGTTCTGAGAAAGCTCTGAGAAGCTCTGAGAAGCACTGACAAAGCTTAAGGACACTTAAGGGATCAACAGATATATGCTACAGCGCACAAACTATAATTGGTGTGTGTTGGGATTCAATGACACCAGTAATGTAGCAGTAATGTGGACCAAATAAATTCACACTGGcttcttttccactgcagggccaAACTGTTCTAAGCAGGGTGTGTAGATGAGATGCTAACAATGTTGGACAAGACCACCAGCCACCATGGGTGCGTTTCCCAAAACATCCTTAAGGCTAAAAACTTTGTAACTTCATTTTATAAACTGCATTTATGTGTACTTTTTCGCTATTATTCTTTATTACTGAgaggttttaaatatatatacttaaatatatatatttttactgttatgTTTACTGTAATATTGCTATAAATCATGTTCATAAATTGTCCATATAATGGGCTTTTcgttaattaatttaattcacaTAAAACATCAGATTTTTCTTAATGAGAGTGTCAGAGATGATCAGACATACGTatctattacatttattaaattcattttatttgtgtttatatacagttttgaaaaaaaaaa

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0004957 prostaglandin E receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007241976.3 True 3786 mRNA 0.45 2 41233845 41252428

Neighbor

gene id symbol gene type direction distance location
gpr137c gpr137c coding downstream 82573 41107720 ~ 41151272 (-)
wdhd1 wdhd1,LOC107583614 coding downstream 150237 41026870 ~ 41083608 (-)
gch1 gch1,LOC107693131,LOC107723641,LOC107564951,LOC107583460,LOC107751761,LOC107680005 coding downstream 210199 40994368 ~ 41023646 (-)
gnpnat1 gnpnat1,LOC107693128 coding downstream 375381 40844960 ~ 40858464 (-)
LOC103044545 NA coding downstream 572108 40651386 ~ 40661737 (-)
rtraf cunh14orf166,zgc:56576,LOC107693089,LOC107583671,LOC107751811,LOC107680004,LOC107725214 coding upstream 96427 41348855 ~ 41359462 (-)
LOC103044494 LOC107679991,LOC103143335,LOC107583669,LOC107564980,LOC103461506 coding upstream 209908 41462336 ~ 41470921 (-)
gpr135 gpr135,LOC107679990,LOC107568507,LOC107564991,LOC107693091 coding upstream 504304 41756732 ~ 41759087 (-)
LOC103028306 lrfn5,LOC108443922,LOC107682216,LOC107572671 coding upstream 1256694 42509122 ~ 42655749 (-)
G87304 NA non-coding downstream 30016 41139566 ~ 41203829 (-)
G87303 NA non-coding downstream 39663 41192136 ~ 41194182 (-)
G87307 NA non-coding downstream 85878 41147486 ~ 41147967 (-)
G87305 NA non-coding downstream 93992 41137867 ~ 41139853 (-)
G87301 NA non-coding downstream 112078 41121039 ~ 41121767 (-)
G87343 nid2,wu:fb77a09,LOC107564977,LOC107680002 non-coding upstream 63332 41315760 ~ 41327496 (-)
G87360 NA non-coding upstream 145329 41397757 ~ 41503593 (-)
G87362 LOC108441856 non-coding upstream 151588 41404016 ~ 41407221 (-)
G87371 NA non-coding upstream 175372 41427800 ~ 41428860 (-)
G87375 LOC107679998,LOC107564960 non-coding upstream 193715 41446143 ~ 41452705 (-)
LOC103044865 NA other downstream 463344 40762672 ~ 40770501 (-)
LOC111193261 NA other downstream 697511 40533368 ~ 40536334 (-)
dicer1 dicer1,LOC107552827,LOC107671118,LOC107668604 other downstream 1375276 39808130 ~ 39858569 (-)
G86432 NA other downstream 3164793 37982874 ~ 38069052 (-)
nrxn3 nrxn3,LOC107755774,LOC107583487 other downstream 4132264 36588904 ~ 37101581 (-)
LOC103040189 NA other upstream 520639 41773067 ~ 41804888 (-)

Expression


Co-expression Network