G15372


Basic Information

Item Value
gene id G15372
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 33613279 ~ 33613527 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20711
ttatcttggtaacagaaaacacaggagctccactgactgaatacaacctagacagacgccaacagtcagacgttcatcgctatctcggtaacacaggcgccgtgccgagccgagcatacacccccacttattacacacacatgaacacacagcagcacaaacccaacttttacatcaacaataaacagaatagtaaataaaataacattgctgttcccgtaaatgagctgctggagctccttcacagcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20711 True 249 lncRNA 0.46 1 33613279 33613527

Neighbor

gene id symbol gene type direction distance location
fat4 fat4,LOC107717300,LOC107694441,LOC106604622 coding upstream 118132 33370578 ~ 33495147 (+)
spry1 spry1 coding upstream 438458 33170110 ~ 33174821 (+)
spata5 spata5 coding upstream 445668 33102293 ~ 33167611 (+)
fgf2 fgf2 coding upstream 520968 33086798 ~ 33092311 (+)
LOC103027667 NA coding upstream 581269 32996562 ~ 33032010 (+)
hs3st1 hs3st1 coding downstream 257788 33871315 ~ 33875047 (+)
LOC103021912 NA coding downstream 268222 33881749 ~ 33898984 (+)
wdr1 wdr1,LOC106565198,LOC106583413 coding downstream 296106 33909633 ~ 33924004 (+)
slc2a9 slc2a9,LOC107569838 coding downstream 315677 33929204 ~ 34013347 (+)
zbtb49 zbtb49 coding downstream 467016 34080543 ~ 34085529 (+)
G15371 NA non-coding upstream 9101 33603952 ~ 33604178 (+)
G15370 NA non-coding upstream 9560 33603439 ~ 33603719 (+)
G15369 NA non-coding upstream 11025 33602021 ~ 33602254 (+)
G15368 NA non-coding upstream 15934 33597138 ~ 33597345 (+)
G15365 NA non-coding upstream 83668 33529044 ~ 33529611 (+)
G15373 NA non-coding downstream 182271 33795798 ~ 33796138 (+)
G15390 NA non-coding downstream 270249 33883776 ~ 33888011 (+)
G15392 NA non-coding downstream 303371 33916898 ~ 33917858 (+)
G15407 tmem128 non-coding downstream 444284 34057811 ~ 34065029 (+)
G15396 NA non-coding downstream 458383 34071910 ~ 34078310 (+)
G15170 NA other upstream 546721 33023236 ~ 33066558 (+)
G15160 NA other upstream 688494 32921024 ~ 32924785 (+)
G14985 NA other upstream 1434681 32174401 ~ 32178598 (+)
smim13 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 other upstream 1568216 32041035 ~ 32045063 (+)
LOC103035097 fam193b other upstream 2435687 31161067 ~ 31177592 (+)
nsg1 LOC108431918 other downstream 409796 34023323 ~ 34121443 (+)
G15411 mcm7,LOC102777806,LOC107716516,LOC107744067,LOC107665623 other downstream 606416 34219943 ~ 34228038 (+)

Expression


Co-expression Network