G37391 (aldoa,aldoab,LOC107720037,LOC107654538,LOC107581735,LOC107674678,LOC107660459)


Basic Information

Item Value
gene id G37391
gene name aldoa,aldoab,LOC107720037,LOC107654538,LOC107581735,LOC107674678,LOC107660459
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18042968 ~ 18055855 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50423
ttttgtgCAGTATCAGCAATATTATGCAGGAATTATAGAATACAGATTgttgttgaattttttttttttcctgagatCTACATACCAAAGCTCTCTTGACGAACTCCTCCTGGCAGGCTTTGGCGTTTTCCTTCTTGCCACCCCAGGCCTTGAGGGCAGATGCCTGCAGGGCACGGCCGTAGGAGAAGGTGAGGGCCCAGGGTCGGTGCAGGGGGCACATGTTCATGGCGTTCAGGTTGACTGAAGCCTCCTCCTCACTCTGGCCTCCAGACAGGAACGTGATGCCGGGACTGCAGGGGGCACGGTGCGGCGCAGGGCGGTGACGGTTGCCATGGCGATCTCCTGGGGGCTGTACTTGTGGGAGCAGGAGTGGCCAGCAGTCACCATGTTGGGCTTGAGCAGAGTTCCCTCCAGGTAAACATGGTGCTCAGACAGAGCCTTGTAGACAGCAGCCAGGACCTTCTCGGTCACATACTGGCACCTCTTCAGGTCGTGGTCGCCATCGGGCAAGATCTCAGGCTCCACGATGGGCACGATGCCATGCCTGGCAGATGCTAGCGTAGCGAGCCAGAACGTTAGCATTCTCCTTGATGGCCAGGCTGGAGGGGGTGGTGGGGGTGATCTTCAGCACGCAGCGCCACTTAGCAAAGTCGGCTCCGTCCTTCTTGTACTGAGCACAGCGCTCGTACAGACCATCCAGACCTGAGGAGAATACATTAGAGagagatttaaaaagaaaacaatcaaGATGACTAAAGAAAATTGATAGGTTTTGGTGTCAGATGAGTAACAAAGATGAGCTAACAAAGCTAACAGAGCTAACTGGtacactatatactgtatatatatatttacctctGTGGATGATGCAGCAACATATTCTAATATAGTTAACATCAACtagtcagggctctccagattctagcaaggaggtgtggagctactttgagctggataaaggtgtaaaaagcgatttatcaggatAAATTAtgcacccagtctgaagggtgtttagacaaactgttaaaatttctggatctctgaaagctgtgggagagcggaggtgtgctattcatcaaagataagaaccttttatcatgttttactacactaatagttcattttacaccagagttctcctttaaggagCAATGTTCATTAACACACCCTGGGTGGTGGTCTCTCCATTGGTTCCAGCCAAAGGGACGACACCTTTATCCACCTTGATGCCGACCACCATGCCTCTCTCCTTGATCAGCTGGGGGAAGAGCTTGCCATCATCAGTCTTCTGGTAGAGAGTCTCGTGGAAGAAGATGACTCCACCGATGCAGGGCTTGATGCGGTCGTCAGCGGTGAAGAGCAGCTGGCGGTAGAACCTCCGGTTCTCCTCAGTGTTCTCAGCATTGATGCTCTGGAAGCGCTTAGCAACGCTGCCTGCGGTGGCGGGAAAGACGACAGTAATCAATGATTGTAATGACACAAATGGAAAGAGGAACCAAAAGGCTAAAATGAGCAAGCAGATCTCATCATACTCTGCCCAGAACACCCACTTTTGTTTCCG
>TU50425
ctcatttttataaaCCACATTTCTCAAAGTGACCTctcacagcagcacaaacatgCAATGGACCACAAACCACGTGTGGGTTAGtcagttctttatttttttgtcgcAGTACAACACAGTGTGTACGTATcatatgaaaaaagaaagaaattaaagtTACACCTAAAAATGGGGGAAAACACAAATACTAAGAGGTCTTCCACAGGTACAAAGACagtgagctctctctctctctctcttgagaATCCTCTTCTTGCTGGGCTAAACGGTGATGGGAGGACGGGGACGGGGAGCCGTGCGGTTACGCAGGTGCTTCTGACGGTGATTTGGTTGGAAACAGTggttaaatgctttaataagcGTGATTGGCCACGAACAGGGACTCTCCAGCAGCTGCTCCTTTATCGCCAGCGGAAGCGTATTTACCGATGGAAGCTGCACTGTTAGCCTGTTAGAGCAAAAAGAGACAGGCTACAGTCATCAGATAAGACATTAGGTGAGGCATTAAATCAGATTTCCTGTGACATCATTCGAAATGAGCAGATTTCCAGTGACCTAATCTTGATAGCAGAAGGATCCACTAGTTATATGAGTGTTATGAAGTTTAATATAATTAGCTGCTTAGCTCAGGAACATGAGCTTAAAACTGAATGtgctaatttgttttttttttatctggataACCCACTGGTCTTgagctgaattttttttttttttagcaaaaacagCTTCAAAATTTAATTTAGGACCACATGTTTGATCCCAAGCATGAAATTCAGgtgttataaattatataataatgaaataaaagcgCTTTTTGAAggttagaaaaaaattataaattttttttaagcaggactggcattttttattatttcaaatgaacacatttaatctaTTAATGGAAATAAATATGGTTTTGGGTTTAGTGGCTTTTTAACATGAAGGAAGGCTTTTTCCTAAATTAGCAGCTTacctggaaaaaagtaaaaaaaaaaaaaagaccatttgtcatccagaaaaaaaaaaaaaatcataccatATGCTGGTTGGTTGGCTCGTTaaccagctcttgaccagcatggGCTATGTTTTTTCGGGATTATATTTTTTAGCAGGAACGGCTTCAGAAGCCGCTTTTAATCCCAAGCAAGAAATTAAGGTGTTATAAATTgtattataacaaaaaatatatatattttatatactgtcacaaaagaacccaggaCAACGAAATCAAAataactgcaggtctcactcgcctaaaataaggtcagtgttcataattcaataataagaaatggtttctatgggagagttccaagacaaaaaaaaaaacacttgccAAGATGTCACTACAATGCACTTTTGTCTGGCATTGCACAGGTTGGTGCATTAAGGTTAACAGcaccatttattattttttacatcatgCCTCAGTTTaatctttcctttcttttttagttattttttctctgataagaatttatatttacattgatGGCGTTTAGCTGATGCTCATATTCAGAGCAGCTTACAAAGTGTTTCTTGTTATTTCTTTTACAGAG

Function

symbol description
aldoab Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be active in cytosol. Is expressed in adaxial cell; cardiovascular system; fin; musculature system; and somite. Orthologous to human ALDOA (aldolase, fructose-bisphosphate A).
aldoa Enables several functions, including fructose binding activity; fructose-bisphosphate aldolase activity; and identical protein binding activity. Involved in several processes, including binding activity of sperm to zona pellucida; fructose 1,6-bisphosphate metabolic process; and purine ribonucleotide metabolic process. Located in several cellular components, including actin cytoskeleton; extracellular exosome; and sperm head.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50423 False 1561 lncRNA 0.50 3 18044625 18046413
TU50425 True 1568 lncRNA 0.36 2 18042968 18055855

Neighbor

gene id symbol gene type direction distance location
LOC103029386 NA coding upstream 3162 18029098 ~ 18039806 (+)
LOC103030008 NA coding upstream 117998 17916864 ~ 17924970 (+)
nif3l1 nif3l1 coding upstream 139259 17896790 ~ 17903709 (+)
cabp5 cabp5a,LOC108425940,LOC107708978,LOC107562016,LOC107693687,LOC105909107 coding upstream 154719 17878595 ~ 17888249 (+)
pagr1 pagr1,LOC107708911 coding upstream 240351 17796834 ~ 17802617 (+)
mapk7 NA coding downstream 72585 18128440 ~ 18138878 (+)
LOC103047175 LOC108441166,LOC108273636,LOC107557340 coding downstream 115499 18171354 ~ 18185983 (+)
LOC103030877 NA coding downstream 144496 18200351 ~ 18214204 (+)
LOC103032559 LOC108441169 coding downstream 276619 18332474 ~ 18343461 (+)
LOC103034039 LOC108441161 coding downstream 364338 18420193 ~ 18449203 (+)
G37151 eif3c non-coding upstream 93780 17941848 ~ 17949188 (+)
G37153 NA non-coding upstream 98468 17943658 ~ 17944500 (+)
G37141 NA non-coding upstream 129883 17912822 ~ 17913085 (+)
G37137 NA non-coding upstream 150006 17892662 ~ 17892962 (+)
G37120 maz non-coding upstream 214300 17822411 ~ 17828668 (+)
G37410 NA non-coding downstream 71245 18127100 ~ 18127560 (+)
G37411 NA non-coding downstream 86149 18142004 ~ 18142378 (+)
G37413 NA non-coding downstream 95513 18151368 ~ 18160034 (+)
G37424 NA non-coding downstream 136755 18192610 ~ 18217283 (+)
LOC111192384 NA non-coding downstream 176741 18232596 ~ 18253772 (+)
G37155 ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 other upstream 71969 17961940 ~ 17970999 (+)
G37152 LOC108425993 other upstream 82664 17952580 ~ 17960304 (+)
G37131 taok2,LOC108425925,LOC108273910 other upstream 179902 17857917 ~ 17863066 (+)
G37099 NA other upstream 323592 17718231 ~ 17719376 (+)
G37098 NA other upstream 326976 17715129 ~ 17715992 (+)
LOC103046566 NA other downstream 8128 18063983 ~ 18099979 (+)
G37404 NA other downstream 51709 18107564 ~ 18113926 (+)
G37531 LOC108441158,LOC108273897,LOC107664611,LOC107708947 other downstream 315523 18371378 ~ 18376345 (+)
LOC103022762 NA other downstream 589780 18645635 ~ 18707728 (+)
G37749 NA other downstream 1273513 19329368 ~ 19331661 (+)

Expression


Co-expression Network