G37410


Basic Information

Item Value
gene id G37410
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18127100 ~ 18127560 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50458
CACTTCTGTTTGTCTACTGTGTGGACAGGTAAGATGGGCGccctacatttacacacacgcaGGAGCACTTTTGTTTAAACACACTAGGTTAGGGGTCGGGTGCTACTTCCTGTATTTtggttagtttagttttttggttaggcagtttagtttgttttattattttcttttcgtTAGCACCGTCCTTTAGTCCACCTTTAGATATTACAGTTtctgttgatttattttctctACGATACACTTTCTAGTTTTGTTATCAACATACTTAATTGctttattctctttatattCAGTTTATTCACTTATTTTCTGATCCattgtatatttgtgttttatactttgacttttgtaataaatttcattttgttttaccGCCAATTGTTGTCCTCCCACTTCCTCCTCATCACATGCATTAATGTTACTCCTCCTCACCCCTAGATAAAAGGGGAGGAGCATAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50458 True 461 lncRNA 0.36 1 18127100 18127560

Neighbor

gene id symbol gene type direction distance location
LOC103029386 NA coding upstream 87294 18029098 ~ 18039806 (+)
LOC103030008 NA coding upstream 202130 17916864 ~ 17924970 (+)
nif3l1 nif3l1 coding upstream 223391 17896790 ~ 17903709 (+)
cabp5 cabp5a,LOC108425940,LOC107708978,LOC107562016,LOC107693687,LOC105909107 coding upstream 238851 17878595 ~ 17888249 (+)
pagr1 pagr1,LOC107708911 coding upstream 324483 17796834 ~ 17802617 (+)
mapk7 NA coding downstream 880 18128440 ~ 18138878 (+)
LOC103047175 LOC108441166,LOC108273636,LOC107557340 coding downstream 43794 18171354 ~ 18185983 (+)
LOC103030877 NA coding downstream 72791 18200351 ~ 18214204 (+)
LOC103032559 LOC108441169 coding downstream 204914 18332474 ~ 18343461 (+)
LOC103034039 LOC108441161 coding downstream 292633 18420193 ~ 18449203 (+)
G37391 aldoa,aldoab,LOC107720037,LOC107654538,LOC107581735,LOC107674678,LOC107660459 non-coding upstream 71245 18042968 ~ 18055855 (+)
G37394 NA non-coding upstream 73545 18051698 ~ 18053555 (+)
G37151 eif3c non-coding upstream 177912 17941848 ~ 17949188 (+)
G37153 NA non-coding upstream 182600 17943658 ~ 17944500 (+)
G37141 NA non-coding upstream 214015 17912822 ~ 17913085 (+)
G37411 NA non-coding downstream 14444 18142004 ~ 18142378 (+)
G37413 NA non-coding downstream 23808 18151368 ~ 18160034 (+)
G37424 NA non-coding downstream 65050 18192610 ~ 18217283 (+)
LOC111192384 NA non-coding downstream 105036 18232596 ~ 18253772 (+)
G37492 LOC108441156,LOC108274106 non-coding downstream 159343 18286903 ~ 18289386 (+)
G37404 NA other upstream 13174 18107564 ~ 18113926 (+)
LOC103046566 NA other upstream 27121 18063983 ~ 18099979 (+)
G37155 ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 other upstream 156101 17961940 ~ 17970999 (+)
G37152 LOC108425993 other upstream 166796 17952580 ~ 17960304 (+)
G37131 taok2,LOC108425925,LOC108273910 other upstream 264034 17857917 ~ 17863066 (+)
G37531 LOC108441158,LOC108273897,LOC107664611,LOC107708947 other downstream 243818 18371378 ~ 18376345 (+)
LOC103022762 NA other downstream 518075 18645635 ~ 18707728 (+)
G37749 NA other downstream 1201808 19329368 ~ 19331661 (+)
G37812 mms19,LOC106578995 other downstream 1353496 19481056 ~ 19484915 (+)
LOC103039215 ubtd1b,ubtd1,LOC108437310,LOC107720068 other downstream 1361339 19488899 ~ 19511441 (+)

Expression


Co-expression Network