G37939


Basic Information

Item Value
gene id G37939
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 20042019 ~ 20042337 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU51166
attgcaccagtaagagcagagtgtgaaggttcagttagcagggtaagagcacagttttactcaaaatattgcaatgcacacaacattatgggtgacacaccagagttcaaaagaggacaaattgttggtgcacgtcttgctggagcatctgtgatcaagacagcaagtctttgtgatgtatcaagagccacggtatccagggtaatgtcagcataccaccaagaaagaccaaccacatccaccaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgtttgagtgctaacccggattgtatccaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51166 True 319 lncRNA 0.45 1 20042019 20042337

Neighbor

gene id symbol gene type direction distance location
LOC111192421 NA coding downstream 183393 19851884 ~ 19858626 (-)
LOC103041897 vstm4,LOC108437315,LOC107720466,LOC107708899,LOC107653934 coding downstream 225838 19802002 ~ 19816181 (-)
LOC103041296 LOC108437306,LOC108274024 coding downstream 261524 19741133 ~ 19780495 (-)
frmpd2 LOC108437313 coding downstream 333410 19678449 ~ 19708609 (-)
LOC103045380 NA coding downstream 409691 19627600 ~ 19632328 (-)
LOC103037418 LOC108274018,LOC108413479,LOC107726266,LOC107719913 coding upstream 692966 20735303 ~ 20781329 (-)
cops3 cops3 coding upstream 741592 20783929 ~ 20797947 (-)
rasd1 rasd1,LOC108412952,LOC107653935,LOC107720458,LOC107602420 coding upstream 824463 20866800 ~ 20869080 (-)
pemt pemt,LOC107719881 coding upstream 834097 20876434 ~ 20968546 (-)
lmf1 lmf1,LOC107580192 coding upstream 939068 20981405 ~ 20990118 (-)
G37936 NA non-coding downstream 27665 20014146 ~ 20014354 (-)
G37934 NA non-coding downstream 65293 19976508 ~ 19976726 (-)
G37929 NA non-coding downstream 190216 19851544 ~ 19851803 (-)
G37928 NA non-coding downstream 190547 19851247 ~ 19851472 (-)
G37927 NA non-coding downstream 192699 19848873 ~ 19849320 (-)
G37941 NA non-coding upstream 6107 20048444 ~ 20048668 (-)
G37953 NA non-coding upstream 149071 20191408 ~ 20191686 (-)
G37962 NA non-coding upstream 231676 20274013 ~ 20274387 (-)
G37963 NA non-coding upstream 242621 20284958 ~ 20285205 (-)
G37966 NA non-coding upstream 302545 20344882 ~ 20345170 (-)
c4h10orf128 NA other downstream 216367 19818268 ~ 19825652 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other downstream 440735 19544225 ~ 19601284 (-)
G37616 NA other downstream 1406921 18633578 ~ 18635098 (-)
G37603 NA other downstream 1468843 18572691 ~ 18573176 (-)
LOC103047479 LOC108441156 other downstream 1724062 18282490 ~ 18317957 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 469334 20511671 ~ 20679431 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 1830983 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 1971168 22013505 ~ 22038504 (-)
ube2d1 ube2d1,ube2d1b,LOC105891213,LOC107583697,LOC108431657,LOC107733527,LOC107717106,LOC107553913,LOC106607701 other upstream 3338308 23380645 ~ 23387442 (-)
LOC111192393 NA other upstream 3422882 23465219 ~ 23510619 (-)

Expression


Co-expression Network