LOC111192381


Basic Information

Item Value
gene id LOC111192381
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18142817 ~ 18160060 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669249.1
gtgattggctgagagcgGGAGGTAATTTTTCAGGTATTTTGTTGGTGGTGAAACTCGCTCCGCGTCTCGGGACCGAAACTCCGCcgctcctcctctctctcactgcgGCTCCTCAGCAGCtcccgctccgctccgctccggtTCAGCTCCGCTCCGGTTCAGCTGGTCTAattgttctggttctggttctggttctggattAGTTTGAGGATGGGTCGGTGGTCTCGTGCTCGGGTTCTGGGGGCGGTTCTGCTGGTTCTGGCAGGTCTGTGGACGACGAGTAAAGCCCAAGAATGTGGTCGTGGTGTGCAGAGCAGGATAGTCGGGGGAACCGATGCTTCAGAGGGTCACTGGCCGTGGCAGGTGGACATACAGaaAAAGTCAGAGCATATTTGTGGAGGGACACTCATCAGTGAGAACTGGGTACTTTCTGCAGCTCACTGTTTTCCTAATCCATCCGACGTGTCCCCCTACAATGTCTACGCAGGTAGACTGCAACTACATGGCTGGAACCCACACGAGATGGAGCGCCAAATCAAACAGATTGTGGTTCCTTTCGGCTACACAGACGCCGAGCTAGGCGAGGACATAGCTCTGGTGATGCTAAGCTCACCAGTCACCTGGAGTGAAGTCATCCAGCCCATCTGCCTGCCGGATTCAGACATGCAGTTTGCTGAAGGCACGCAGTGCACCATCACCGGCTGGGGGGACATCAGAGATGGAGTCTCTCTGCAGGGCGTGGGCACACTGCAGCAGGTACAGGTGCCAATCATCGGCCAATCAGCATGTCAGGAGATGTTTACAGGAGAAAAATTCGGCATTCGGCATGACATGATCTGCGCTGGTTACAAAGAGGGGGGCAAAGATTCCTGCCAGggtgattcTGGAGGTCCTCTGGTGTGTCTGTCGGAGAGTGGTAAATGGGTTCAGGCCGGGATCGTGAGCTTTGGTCTAGGCTGCGCTCAGCCCAATCGGCCGGGAGTCTACGCCAGGGTGTCTGCCTTCAGCAGCTTCATCCAGAACAACGTAAAGGGACTGCGTCTGTACAGCGCAGCGCCGCAGAACTGGAGCGGCTGGATCGTAACACTGATCAGGACTATCTCTATGTTGGTGATTGTACTGCTAACTTAATACCAAAATGAATGACTTATGAAATGAAAGGCAGCGAGATATGAAGAGGTAACGCATACTGTGATTATTGTTCCAGCCTCGATCTGCAGGCATCTCATTTTTATCACTTACTGACCTGCCACTCTACTTTCCTGTCTAGAGCCGGTACTCCAATAACAACCGGAGAACAGTAACCAATTTGGCTggaaatgtacagtacaggctaaaggtttgga

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K09628 PRSS27; serine protease 27

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669249.1 True 1346 mRNA 0.53 7 18142817 18160060

Neighbor

gene id symbol gene type direction distance location
LOC103029702 LOC108441164,LOC108413442 coding downstream 16435 18123021 ~ 18126382 (-)
LOC103046869 NA coding downstream 24964 18100566 ~ 18117853 (-)
aldoa aldoa,aldoab,LOC101465268,LOC107720037 coding downstream 86088 18043042 ~ 18056729 (-)
LOC103046263 NA coding downstream 127723 17992067 ~ 18015094 (-)
LOC103023915 NA coding downstream 156328 17972588 ~ 17986489 (-)
LOC111192382 NA coding upstream 60811 18220871 ~ 18232563 (-)
LOC111192383 NA coding upstream 75078 18235138 ~ 18241122 (-)
LOC103031189 NA coding upstream 82859 18242919 ~ 18253834 (-)
LOC103031500 LOC108441168 coding upstream 110322 18270382 ~ 18278701 (-)
LOC103032028 NA coding upstream 188437 18348497 ~ 18358860 (-)
G37451 NA non-coding downstream 440 18142007 ~ 18142377 (-)
G37450 NA non-coding downstream 1741 18140792 ~ 18141076 (-)
G37449 NA non-coding downstream 3695 18137949 ~ 18139122 (-)
G37444 NA non-coding downstream 15257 18127254 ~ 18127560 (-)
G37443 NA non-coding downstream 16010 18126534 ~ 18126807 (-)
G37455 NA non-coding upstream 11082 18171142 ~ 18171354 (-)
G37456 NA non-coding upstream 25534 18185594 ~ 18186290 (-)
G37457 NA non-coding upstream 26308 18186368 ~ 18186911 (-)
G37458 NA non-coding upstream 26989 18187049 ~ 18188008 (-)
G37459 NA non-coding upstream 28413 18188473 ~ 18189444 (-)
vps25 vps25 other downstream 346829 17789951 ~ 17795988 (-)
cntd1 NA other downstream 437794 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 453433 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 665939 17473910 ~ 17476878 (-)
G37290 NA other downstream 676793 17432972 ~ 17466024 (-)
LOC103047479 LOC108441156 other upstream 122430 18282490 ~ 18317957 (-)
G37603 NA other upstream 412631 18572691 ~ 18573176 (-)
G37616 NA other upstream 473518 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1384165 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1658208 19818268 ~ 19825652 (-)

Expression


Co-expression Network