G26953


Basic Information

Item Value
gene id G26953
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 48259382 ~ 48259692 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU36218
tccgcacctaaaacctcccgcgatgaagcaaaaccgaccctaaccgagcggatctccgctccgcacctaaaacccgcccgcgatgaaacgaaaccgaccctaaccgagcggatctccgctccgcacctaaaacccgcccgcgatgaaacgaaaccgaccctaaccgagcggatctccgctccgcacctaaaacccgcccgcgatgaaacgaaaccgaccctaacccgCTCGTTTTCATCGCAGGACATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36218 True 251 lncRNA 0.59 2 48259382 48259692

Neighbor

gene id symbol gene type direction distance location
hsdl1 NA coding downstream 1120064 47134735 ~ 47139318 (-)
LOC103033231 LOC103033231,LOC108424426,LOC108257936 coding downstream 1125081 47129070 ~ 47134301 (-)
LOC103043748 LOC108424468 coding downstream 1130600 47126477 ~ 47128782 (-)
LOC103044766 LOC103044766,LOC108424467,LOC108257939 coding downstream 1134912 47122168 ~ 47124470 (-)
LOC103044065 LOC108424424 coding downstream 1157751 47096096 ~ 47101631 (-)
slc35f1 slc35f1,LOC107697151,LOC107743307,LOC107727669,LOC107678858 coding upstream 66193 48325885 ~ 48446366 (-)
cdk19 cdk19 coding upstream 185685 48445377 ~ 48539382 (-)
ppil4 ppil4 coding upstream 302812 48562504 ~ 48576593 (-)
katna1 katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 coding upstream 463308 48723000 ~ 48735370 (-)
mdn1 mdn1,LOC107755265,LOC107601919,LOC107737285,LOC107597457 coding upstream 487208 48746900 ~ 48851645 (-)
G26944 NA non-coding downstream 44124 48212095 ~ 48215258 (-)
G26888 NA non-coding downstream 370036 47887751 ~ 47889346 (-)
G26868 NA non-coding downstream 561802 47697381 ~ 47697580 (-)
G26863 NA non-coding downstream 577621 47681169 ~ 47681761 (-)
G26859 NA non-coding downstream 588920 47667957 ~ 47670462 (-)
LOC111188411 NA non-coding upstream 133429 48393121 ~ 48394416 (-)
LOC111188398 herc2 non-coding upstream 176084 48435776 ~ 48438690 (-)
G27029 NA non-coding upstream 292544 48552236 ~ 48552562 (-)
G27030 NA non-coding upstream 293140 48552832 ~ 48553160 (-)
G27035 LOC108427529 non-coding upstream 326355 48586047 ~ 48694424 (-)
G26754 NA other downstream 1520646 46704347 ~ 46738736 (-)
fkbp3 fkbp3 other downstream 1723547 46533695 ~ 46535835 (-)
G26695 prpf39,LOC107729032 other downstream 1733386 46518871 ~ 46525996 (-)
naa30 naa30,LOC108270341 other downstream 1823457 46427417 ~ 46435925 (-)
G26636 LOC108411685,LOC108258103,LOC101066055,LOC105902101 other downstream 1966576 46292087 ~ 46292806 (-)
pln NA other upstream 18570 48278262 ~ 48288736 (-)
G27145 NA other upstream 627302 48886994 ~ 48891028 (-)
G27258 NA other upstream 1379067 49638759 ~ 49639444 (-)
G27400 NA other upstream 2222197 50481889 ~ 50531639 (-)
LOC103034285 NA other upstream 2263207 50522899 ~ 50539672 (-)

Expression


Co-expression Network