trnat-ugu_7


Basic Information

Item Value
gene id trnat-ugu_7
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 6923067 ~ 6923139 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnat-ugu_7
GGCTCCATAGCTCAGAGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGCGAGTTCAATTCTCGCTGGGGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-ugu_7 True 73 tRNA 0.56 1 6923067 6923139

Neighbor

gene id symbol gene type direction distance location
galnt1 galnt1,LOC107657719,LOC107723435 coding downstream 26247 6675076 ~ 6896820 (-)
nr4a3 nr4a3,LOC107596005,LOC107657725,LOC107687818,LOC107593690 coding downstream 511646 6368118 ~ 6411421 (-)
stx17 stx17 coding downstream 570970 6333311 ~ 6352097 (-)
invs invs coding downstream 631539 6235809 ~ 6291528 (-)
LOC103026216 NA coding downstream 738753 6172797 ~ 6184314 (-)
trnat-ugu_8 NA coding upstream 104 6923243 ~ 6923315 (-)
trnat-ugu_9 NA coding upstream 282 6923421 ~ 6923493 (-)
trnat-ugu_10 NA coding upstream 460 6923599 ~ 6923671 (-)
trnat-ugu_11 NA coding upstream 1989 6925128 ~ 6925200 (-)
trnat-ugu_12 NA coding upstream 2525 6925664 ~ 6925736 (-)
G16965 NA non-coding downstream 4410 6918196 ~ 6918657 (-)
G16962 NA non-coding downstream 23587 6899211 ~ 6899480 (-)
G16951 NA non-coding downstream 139836 6775573 ~ 6783231 (-)
G16939 NA non-coding downstream 250311 6670069 ~ 6672756 (-)
G16921 NA non-coding downstream 277073 6643203 ~ 6645994 (-)
G17086 pdp1,LOC107593682,LOC107706250,LOC107687812 non-coding upstream 73259 6996398 ~ 7001156 (-)
G17093 NA non-coding upstream 88864 7012003 ~ 7015844 (-)
G17117 esrp1,LOC107706288 non-coding upstream 225438 7148577 ~ 7155902 (-)
G17121 NA non-coding upstream 263054 7186193 ~ 7186801 (-)
G17122 NA non-coding upstream 263726 7186865 ~ 7187855 (-)
sec61b sec61b,LOC102796100 other downstream 378792 6534859 ~ 6544275 (-)
LOC111191940 NA other downstream 560062 6354945 ~ 6363005 (-)
LOC103024654 NA other downstream 812784 6105816 ~ 6110283 (-)
glipr2 glipr2,glipr2l,LOC107706057,LOC107689891 other downstream 822723 6083120 ~ 6100344 (-)
G16709 NA other downstream 1222580 5697045 ~ 5700487 (-)
LOC103026934 ahrr,LOC108431062 other upstream 1001790 7924929 ~ 8007620 (-)
LOC111188216 NA other upstream 1937995 8861134 ~ 8886317 (-)
G17638 NA other upstream 2639288 9562427 ~ 9562725 (-)
mak mak other upstream 3072006 9995145 ~ 10009151 (-)
G17792 NA other upstream 3323536 10246675 ~ 10247318 (-)

Expression


Co-expression Network