CI01000010_05594817_05606739 (ABL2)


Basic Information

Item Value
gene id CI01000010_05594817_05606739
gene name ABL2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 5593631 ~ 5606739 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_05594817_05606739.mRNA
ATGTATTGGGAACTGTGGATCAGTCAGTTGACCAGGACTGGGAAGCACTGCATGCTGGTTAGGAATAAAGAGGCCCTGCACAGGCCGTTTGGACTGGACTCGACGGCGCTGACTGAAGCGGTGCGCTGGAGCTCAAAGGAGAATCTGTTGGGTGCTGCGGAGAGTGACCCGAACCTGTTCGTTGCGCTTTACGACTTTGTTGCCAGTGGTGACAACACGCTGAGCATCACGAAAGGAGAGAAGCTGCGAGTGTTGGGGTACAATCAGAATGGAGAGTGGAGTGAAGTCCGTTCGAAGAATGGCCAGGGTTGGGTACCCAGTAACTACATCACCCCCGTGAACAGTCTGGAGAAGCACAGCTGGTATCATGGGCCCGTGTCCCGCAGCGCCGCGGAGTACCTGCTCAGCAGCCTGATCAACGGCAGCTTCCTGGTGAGGGAGAGCGAGAGCAGCCCTGGCCAGCTCTCCATCTCGCTTCGCTACGAGGGACGGGTCTATCACTACCGGATCAACACCGCCTCTGACGGAAAGGTCTACGTAACTGCTGAGAGTCGTTTTAGCACGTTAGCTGAGCTGGTTCATCATCATTCCACAGTGGCAGATGGTCTGGTAACCACACTACACTATCCCGCTCCAAAATGCAACAAGCCAACCGTCTACGGCGTCTCTCCCATCCACGACAAGTGGGAGATGGAGCGCACCGACATCACCATGAAGCACAAATTGGGCGGTGGCCAGTACGGAGAGGTGTATGTCGGAGTTTGGAAAAAGTACAACCTCACTGTAGCTGTAAAAACACTAAAGGAGGACACCATGGAAGTTGAGGAGTTTCTGAAGGAGGCTGCAGTCATGAAGGAGGTGAAGCATCCCAATCTAGTACAGTTACTGGGTGTGTGTACACTGGAGCCTCCATTCTACATAGTGACCGAGTACATGCCCCACGGGAACCTGCTGGATTATCTGCGTGAGTGTGACAGGGAGCAGGTGAACGCTGTGGTGCTGCTCTACATGGCCACTCAGATCTCCTCCGCTATGGAGTATCTGGAGAAGAAGAACTTTATCCACAGGGACTTGGCTGCTCGTAATTGTCTGGTTGGAGAGAATCACGTGGTCAAGGTGGCTGATTTCGGACTGAGCCGTCTGATGACAGGCGACACCTACACCGCTCATGCAGGTGCCAAATTCCCCATAAAATGGACAGCACCAGAGAGTCTGGCCTACAACACCTTCTCCATCAAATCAGATGTGTGGGCATTTGGAGTTTTGCTTTGGGAGATTGCGACGTACGGCATGTCTCCATACCCGGGTATCGACCTGTCTCAGGTGTACGACCTGCTGGAGAAGGGCTATCGTATGGAGCAGCCCGAGGGCTGTCCCCCTAAAGTTTACGAGCTCATGAGAGCCTGTTGGCAGTGGAGTCCACTGGATAGACCCTCATTTGCTGAGATTCACCAGGCCTTTGAGACCATGTTCCATGACTCAAGCATCTCAGAAGAGGTAGCCGAAGAACTGTGTAAAACCGCATCTAGTGGGCAAGGTGGGCTTGCACACACTTTCGGCCACGATATGCCACTCTTGCCATCAAAGTCTCGTGGCCAGAAGAAACACTCTGAGAACAAAGAGAATATGGAGGAGGCAGGACCCCATGGCCCTGCAGGTCTTGCAGCATCCCTTTTTGTTGGTGATGGACGCTCCAGCAGCTCTCCAGCCCTACCACGTAAACAGAGGGATAAGTCTCCCTCTAGCCTGCTGGAGGACTCCCAGGACACCACCTTCACCCGTGACCGCAAAGCTGGCTTCTTCAGTTCTTTCATGAAGAAGAAGTCCATGTCCTCATCTTCTACTTCATCCTCACCTCAGCAGCAGCAGAATCTCCCAATGCCACCCAAGAGGAGCAGCTCTTTCCGGGAGATGGAGACCCAGCCTCATAAAAAGTATGAGCCCACGGCTGGGTTTGCAGGCCCTCCTCCTCCTTTGCCCCAGACTGATGGGTTGAGTTTCTCTCCATCTCATGGAGAGGGGAACCATGTACAGTCCCGCTGTTGTGGGGCCACGTTTGGGCAGAAGCCCTCATGTTCAAACTCTGGAGCAACCTCTGGTCAAGTGGGAGGAAGCAGTAGTTGGGGAAGCCTAGCTGGCTTCTTCACTCCTCGCCTTATCAAAAAGACCCTGGGATTGCGGACTGGTAAGCCTTCTGGGATAGACGAAGGGAGTGGGACCAAGCCATTCCCTCGTTCCAATTCAACTTCGTCTATGTCTGCTGGGTTGCCAGACTTAGAGCGCATGGCATTGACATTACCAAGAAACCGTAGCAAACCCCCACTAGAGCGCACAGCTTCCACCACCTCACAGCCAGAGAACGGGGCAGCACGACCTTCGGATGCAATTCTGAGGAAGCTTGATGAAGGTACGGCTCAGATACGGGATCGTCCCAAAGCCAAACTCTTGCCACGAGGGGTCGCAGGTGGAGTTAGGGCACCAGGTGTAGGGGGAGAGGCTGATTCGGACTCCAACACACGGGGAAAGGATGGCCAAGATGACAGGCAAGGCTGGTCGTCTCCATCGAAAACCTCCACCCTTGGTTCAGTCAATCTGCACAACCACAAAGTTCCAGTTCTGATCTCACCAACCCTAAAGCACAGCTCGACCGACGGCCTAGTTGGCGTGGACTCTCAGGGCAACCGCTTCAAACTGCTGTCTGACAGTGGGGATCGTGACCGACCACGACTCGTGAAGCCAAAATGTGCACCACCTCCACCGCCCATGCTCCGTTCCCTCCAACACGCCTACAGTGCCGATGCAGCTGATGAAGCAGTAAGTGGGAACATGGAGGTCAATGGAGATGGCGTCAGAAGGTCAGGGAGAGAAGCCAGAGGGACACGTCCATCAATACCACCACCACAAGTGCCTCCAGCTCCCATAGTCCCTACTAGCAACACCACCACCCAGACTAAGATGGCCAACGGTGCTTCCAGTGGCGGACCTGGCCCTACTTCCGCCAAACCCACCCTTAGACGGACTCGGCAGCAGACAGAACGGATCCCCCTGGAGAAGATCAGCAAGGAGGCTCTTTTGGAATGTGCTGAATGCTTGAGTAGTGCTCTTCAAGGCAACACCGAGCTTTCTTCCAGCAGCCAGGTTCTGGATGTGGGACACCAACTTTTGGACTATTGCTCGGGGTATGTCGATTGCATCCCACAGACGCGTAATAAGTTTGCCTTTCGCGAGGCAGTGGGTAAACTGGAGTTGAGTCTACAGGAGCTGCGTGCTTCCTCTGCGGGTGGGGGAGCGGGACTAGGGGCACCTGGGACCAGTCCGGCTCTTGACAACTTGCACACATGCATTAAAGAGATCAGTGATGTAGTGCAAAGGTAGCCACCTCTAGCTACACTCTCCAAAACTCCTCCTCCTGTACCCCTTGAAACTTTTTGCCCCAAAATCAATCTAGTTTTATTTAAATTTTGGGGGACAGAGATTATTCTCTAAAAAGTACCTCAGAAAATTATTACAAACACATACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTGTTTACAGGTGACTTTCTCATTGAAATTGCCAGTTGGGAACAGAGTTCATTGTATATAAGCTTTTTGTCACTACCAAAATACACATGGTTTTGTTTTTGACAGATTTACTTTGTAATTAATATTTACAGTTTTATCTTGGTATGACAGAATGAATTTTCACAAATAGACAGGGGTTGCACAGGTTAAGGTGAGCCTACTACATGCTAACTGGTCCACTTATCATCCATTTTGTTTTTAGATAAAGATTTCCATTCACTTTTTTTGGATCTTTAATTTGCATTTGATTCACAGTAACTGGATATTGCATCAGATTGTCAATGCGAATATGCCCACCATTTGAAACATGAATCAATTTTGCTTAATCATAAACAAAATTGCTTGTTCAGAACATAGAGTAGTAATGAATGTGGATTGCAAACACAGTCAGCTCACATTTGTTCAGTTTCATTTTACACACAAAAAACTGCTTCTGTCTACATCCCATACTGTCATTTTTAATTTGACCATATTTGTTAAACACTACAGCATTTGATGACCATTGATGATTTTGTAGAGCTTTCTGTAATTAGTCTTTATTTTGATATGGTCCATGCATTAGTTGTTAGTAGTGGTTTGCTGTGGCGTAGTTGAAATGGTGTTGGGTCTGTCACCACATGGATCATGTTTGGCCTTTTATATCTGTGGCCTTTAGATAATTTCCCCATCAGCAAGATGACACACAACTACATTCATAATCTAGAGTTCTTAACACTCGAGAATTCTAAACATATGTCTAGATTTTATTGATTTGCCGTAGGGGAATTATTTGATGTGTGGATAGTCCGAATTTATTTTATGACTATGTCATGGTGCCAACACAAAAGCAGCAACACTACAGATACAAGTATTGCCAAGTCTTTTAACACGCATTTTCTTTAGCACATTGATTTGTAATTTTATTTTGATTTCACTTTAGAATGTCGCCATTTGTAAACTTGAATTTTAAATTATTTTCTATTAAA

Function

symbol description
abl2 Predicted to enable protein tyrosine kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in adaxial cell; myotome; and somite. Orthologous to human ABL2 (ABL proto-oncogene 2, non-receptor tyrosine kinase).

GO:

id name namespace
GO:0042127 regulation of cell population proliferation biological_process

KEGG:

id description
K08887 ABL2; abelson tyrosine-protein kinase 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_05594817_05606739.mRNA True 4561 mRNA 0.49 11 5593631 5606739

Neighbor

gene id symbol gene type direction distance location
CI01000010_05538251_05562058 FNBP1L coding downstream 31573 5537781 ~ 5562058 (-)
CI01000010_05516002_05519888 NA coding downstream 73713 5515967 ~ 5519918 (-)
CI01000010_05508908_05511594 NA coding downstream 81927 5508779 ~ 5511704 (-)
CI01000010_05451275_05454147 NA coding downstream 138852 5450966 ~ 5454779 (-)
CI01000010_05449676_05450653 NA coding downstream 142978 5449580 ~ 5450653 (-)
CI01000010_05627867_05634808 SOAT1 coding upstream 19831 5626570 ~ 5634808 (-)
CI01000010_05636005_05648665 NA coding upstream 29167 5635906 ~ 5648665 (-)
CI01000010_05672032_05717224 CACNA1E coding upstream 63268 5670007 ~ 5717656 (-)
CI01000010_05734012_05743267 CACNA1E coding upstream 127058 5733797 ~ 5743499 (-)
CI01000010_05743309_05757933 CACNA1E coding upstream 136570 5743309 ~ 5757933 (-)
G64721 NA non-coding downstream 1776 5591481 ~ 5591855 (-)
G64746 NA non-coding downstream 88649 5501157 ~ 5504982 (-)
G64733 NA non-coding downstream 108202 5485179 ~ 5485429 (-)
G64712 NA non-coding downstream 120635 5472768 ~ 5472996 (-)
G64710 NA non-coding downstream 122958 5470404 ~ 5470673 (-)
G64818 NA non-coding upstream 220839 5827578 ~ 5881023 (-)
G64837 NA non-coding upstream 227275 5834014 ~ 5836359 (-)
G64867 NA non-coding upstream 282206 5888945 ~ 5889757 (-)
G64879 NA non-coding upstream 312504 5919243 ~ 5919629 (-)
G64910 NA non-coding upstream 422260 6028999 ~ 6029709 (-)
G64564 NA other downstream 350705 5049155 ~ 5242926 (-)
CI01000010_04612793_04613017 SMIM15 other downstream 980075 4612460 ~ 4613135 (-)
G64237 NA other downstream 1357215 4229950 ~ 4236416 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other downstream 1693720 3890069 ~ 3899058 (-)
CI01000010_03527436_03530341 NA other downstream 2061979 3527408 ~ 3530359 (-)
G64877 NA other upstream 309518 5916257 ~ 5917011 (-)
G64918 NA other upstream 486950 6093689 ~ 6096480 (-)
G65453 NA other upstream 2056952 7659435 ~ 7672343 (-)
CI01000010_07880416_07900104 NA other upstream 2235897 7880375 ~ 7900104 (-)
G67099 NA other upstream 3034951 8641690 ~ 8674897 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035518 abl2 coding NC_007119.7 CM002892.2 14915332 ~ 14985276 (+)