G112052


Basic Information

Item Value
gene id G112052
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 18978644 ~ 18978843 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU151447
gattagtaggttctggggtttgataacagatggatggtgctgtgctggttagattagtaggttctggggtttgataacagatggatggtgctgtgctggttagattagtaggttctggggtttgataacagatggatggtgctgtgctggttagattagtaggttctggggtttgataacagatggatggtgctgtgctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151447 True 200 lncRNA 0.45 1 18978644 18978843

Neighbor

gene id symbol gene type direction distance location
LOC103041993 inpp4ab,LOC108437834,LOC108273053,LOC107566790 coding downstream 624130 18288510 ~ 18354514 (-)
LOC103041078 cacnb4b,LOC108437833,LOC108272385,LOC107566792,LOC107688838,LOC107748538,LOC107705621,LOC107660102,LOC107596307 coding downstream 696366 18232082 ~ 18282278 (-)
LOC103040586 LOC108437832 coding downstream 769654 18191678 ~ 18208990 (-)
LOC103040268 LOC108437831,LOC108272774,LOC107596329,LOC107660144,LOC107705618 coding downstream 794657 18173975 ~ 18183987 (-)
LOC103039642 des,desmb,LOC108437828,LOC107660100,LOC107705613,LOC107566324,LOC107566784 coding downstream 886608 18079358 ~ 18092036 (-)
tgfbrap1 tgfbrap1,LOC107596311,LOC107738304,LOC107688833,LOC107748533,LOC107660108 coding upstream 172635 19151478 ~ 19184389 (-)
psmd12 psmd12 coding upstream 380501 19359344 ~ 19366934 (-)
micall1 micall1,LOC107716893,LOC107569466,LOC107710163,LOC107694909 coding upstream 429893 19408736 ~ 19446161 (-)
LOC103028781 LOC103028781,LOC108424728 coding upstream 510935 19489778 ~ 19496459 (-)
LOC103027619 NA coding upstream 563427 19542270 ~ 19546674 (-)
G112050 NA non-coding downstream 49862 18926880 ~ 18928782 (-)
G112047 NA non-coding downstream 93054 18885302 ~ 18885590 (-)
G112034 NA non-coding downstream 275067 18703275 ~ 18703577 (-)
G112022 NA non-coding downstream 407478 18397336 ~ 18571166 (-)
G112016 NA non-coding downstream 590603 18387829 ~ 18388041 (-)
G112055 NA non-coding upstream 9232 18988075 ~ 18988289 (-)
G112085 NA non-coding upstream 83247 19062090 ~ 19102918 (-)
G112093 NA non-coding upstream 90042 19068885 ~ 19069951 (-)
LOC111193739 NA non-coding upstream 91763 19070606 ~ 19082785 (-)
G112100 NA non-coding upstream 134228 19113071 ~ 19131758 (-)
G112029 NA other downstream 345784 18632201 ~ 18632860 (-)
G111970 dnpep,LOC106575848 other downstream 874186 18103829 ~ 18104458 (-)
G111763 NA other downstream 1454258 17523646 ~ 17524386 (-)
G111664 NA other downstream 2211339 16764687 ~ 16767305 (-)
G110969 NA other downstream 5117569 13860585 ~ 13861075 (-)
G112125 NA other upstream 245759 19224602 ~ 19225084 (-)
LOC103029406 LOC556764,LOC108424762,LOC105913225 other upstream 487710 19466553 ~ 19479907 (-)
LOC103026630 LOC103026630,LOC108424735,LOC105910165,LOC105910166,LOC107705921,LOC107568399,LOC107676721 other upstream 609191 19588034 ~ 19636446 (-)
G112280 NA other upstream 753761 19732604 ~ 19733373 (-)
zglp1 NA other upstream 855565 19834408 ~ 19842292 (-)

Expression


Co-expression Network