CI01000010_06083696_06089271


Basic Information

Item Value
gene id CI01000010_06083696_06089271
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 6083543 ~ 6089574 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_06083696_06089271.mRNA
ACTGCCCGTCCTTATCTTCACCTGTATCTATTTACGTCTATTGTATCAAACCCTTCATGATAGACAATAAGCCAAAAGTATTTCACTTAAAGATTATATGATGTGAACTCACAAACTTAGGCTACTAATGACCCACTTCACAGTAGGTTTAATTTCCACAGAACAACATGATAATTAAACAATAAACCGTTTTGCACTGTATATGGAGAGCTACCATGACTTATTTTATGACTGTTCAGATTCAGCATTCAAAAAGTAGGCATTTGTTTTGATCTACATTCGCCCTCTAGTGGAGAAACCACTATGAGCAACCTCGTCACAGCCCTCGTCATAGAGCTTCAACCAATCAGCGCGCAGATCAACAGCACCTACCAACCAATCAGCGCTCACATCAACAGGAACTGTAACAATGGAGGCGAGCATGAAGCCCGTGGACCATATGGGAGCGCTATAACCTTTTGCTCCAGTGTTGACACTTTTGAGAGCAGATCAGTGGCTGTGGATGAGGTCTTGCAGGAGCTGAGGAGAGAGGCATCATTCACCTGTCTGATAGGCTGGAGAGATGAGACCCTGATTCTTTCATATTTATCAGAGTGCATTTCTTTTCAGCAATACGCTGTGATGCCCAGGTATTGTGACCCTCCGCTGATGTATATGGAGAGAGCAGCTACAAGTCTGTTTGGAGTGAAACGGTACGGCGTCCATGTCAATGGCTACACTCGGGATTCAAGTGGCAATCTTAATATGTGGCTGGCACGACGATCTCTGACCAAACAGACGTATCCAGGAAGACTGGACAACATGGCGGCTGGAGGACTGGCAGCAGGCTGTAGTGTAAGACATACCTTGGTAAAAGAGTGTGAAGAGGAGGCCTGCATCCCTCCAGGTCTGGCAGAGCAAGCGCGTCCGGTAGGAACTGTGAGCTACACCTACGAAGATGACGAAGGAATATTTCCTGAGTGTCAGTTTGTCTTTGATTTAGAGCTGCCTCTCAATTTTCAGCCTCATATTGGAGACGGAGAAGTGCAAGCATTTTACTACTATCCAATTGAGAAGGTGAAAGATCTCCTGGTCAGTGAGGAGTTTAAGCCAAACTGTGCCATGGTGGTTCTGGACTTCCTCATCAGACACGCCATCATTGAGCCAGACTCAGGTTTGGTGTCAGATCACCTGGTCAAATTTGATAAGCCCTATTATCACGAATTTGTGGCTGGATTGCACAGATCACTGTAAAGACTGACTGGTGATGTGCAACTGGTCAACTTGCAAAAGTTTGGTATTTATTTTATCTACCTCTGCCTTTAACTCCTAACATTGTCAGCATGTGTACTAGTGAAGAAATGAGGTATTTTATGCAAACGTCAACTGGAGAAGAGACAAAATAAA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_06083696_06089271.mRNA True 1386 mRNA 0.45 8 6083543 6089574

Neighbor

gene id symbol gene type direction distance location
CI01000010_05921406_05962819 NA coding downstream 120724 5921124 ~ 5962819 (-)
CI01000010_05743309_05757933 CACNA1E coding downstream 325610 5743309 ~ 5757933 (-)
CI01000010_05734012_05743267 CACNA1E coding downstream 340044 5733797 ~ 5743499 (-)
CI01000010_05672032_05717224 CACNA1E coding downstream 365887 5670007 ~ 5717656 (-)
CI01000010_05636005_05648665 NA coding downstream 434878 5635906 ~ 5648665 (-)
CI01000010_06107283_06108881 UGT5E1 coding upstream 16005 6105579 ~ 6108989 (-)
CI01000010_06180084_06216445 DOC2D coding upstream 90510 6180084 ~ 6216445 (-)
CI01000010_06253230_06263855 LONRF1L, LONRF1 coding upstream 162792 6252366 ~ 6263855 (-)
CI01000010_06456276_06481282 SLC5A5 coding upstream 366702 6456276 ~ 6481427 (-)
CI01000010_06504062_06505040 NA coding upstream 414409 6503983 ~ 6505276 (-)
G64794 NA non-coding downstream 7869 6074699 ~ 6075674 (-)
G64916 NA non-coding downstream 21462 6061846 ~ 6062081 (-)
G64911 NA non-coding downstream 25400 6032036 ~ 6058143 (-)
G64910 NA non-coding downstream 53834 6028999 ~ 6029709 (-)
G64879 NA non-coding downstream 163914 5919243 ~ 5919629 (-)
G64918 NA non-coding upstream 5867 6093689 ~ 6096480 (-)
G64819 NA non-coding upstream 63598 6153172 ~ 6153751 (-)
G64795 NA non-coding upstream 77162 6166736 ~ 6181828 (-)
G64932 NA non-coding upstream 92627 6182201 ~ 6182443 (-)
G64934 NA non-coding upstream 94828 6184402 ~ 6184611 (-)
G64877 NA other downstream 166532 5916257 ~ 5917011 (-)
G64564 NA other downstream 840617 5049155 ~ 5242926 (-)
CI01000010_04612793_04613017 SMIM15 other downstream 1469987 4612460 ~ 4613135 (-)
G64237 NA other downstream 1847127 4229950 ~ 4236416 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other downstream 2183632 3890069 ~ 3899058 (-)
G65453 NA other upstream 1574117 7659435 ~ 7672343 (-)
CI01000010_07880416_07900104 NA other upstream 1753062 7880375 ~ 7900104 (-)
G67099 NA other upstream 2552116 8641690 ~ 8674897 (-)
CI01000010_11929215_11933223 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 5839387 11928448 ~ 11933343 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location