CI01000010_06385742_06386887 (B3GNT3)


Basic Information

Item Value
gene id CI01000010_06385742_06386887
gene name B3GNT3
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 6385740 ~ 6387238 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_06385742_06386887.mRNA
ATGAAGATGAGAATGATCAACGAGACAATAGCGTTAATTCTCACAGGTGTTGTGTGCCTCTTCGTTATCATGAACAAAAATGACACTGAAGACGACATGACACTGAATAGCAAGGACACATATGAGATGCTCCGTCATGAAACCGATTTGCTCAGATCTGAAACTCCCCAGCCTTTGTTTTCACAATGTCAGCAGAATATGTCTGCTTATAATGTGACAGGATTTTCTACTCTGCCAGGTCATATCCAAGATTTCCTGCTTTACCGACACTGTAGGAAGTTTCCCATGCTGCTTGACCAGCCTGATAAGTGTGGCGGACCCCTGAACTCTGCAGATGTCTTTCTTCTGCTGGTCATCAAGAGTTCTCCAGAAAACTACGATCGACGAGAAGTCCTGCGGAAAACATGGGCTAAGGAAAGACTGTACAAAGGTGTGTGGATCCGTACAGTCTTCATAATCGGAACAACAAAAACTGGCTATGAGAAGCGCAGGTTGAATAAGCTATTGAGGCTGGAGAACAATGAGAACAAGGACATTTTGCAGTGGGACTTCAATGATTCGTTCTTTAATCTCACATTGAAGCAGATCCTTTTCTTAGAGTGGATGGAAAGATGGTGCCCAAATGCTAGATTTCTCTTAAACGGGGACGATGACATCTTTGCCAATACATTTAACATGGTTGAGTATCTTCAAGGTCAAGAGGACAATGATGGAAGTAAACATCTCTTTACCGGGCACCTCGTCCAGAAGGCAAAGCCTATTAGACACCCTTCAAGTAAATACTATGTCCCTGTGCAGGTTCAGGAGTCTGAGAGCTATCCTCTGTACTGTGGCGGAGGAGGCTTTCTTCTCTCCGGCTTCACGGCCAGAACAATCTACAAAATGTCTCACTCTATAATTCTGTTGCCCATTGATGATGTTTACATGGGAATGTGTTTGGAAAAGGCTGGCCTCAAACCTATGTCCCACTTTGGTGTAAGAACTGCTGGTCTGCATGTCCCAGGTGAGGACGTCGACAAATTTCACCCTTGCTATTACAGAGAAATCATTTTAGTCCACAGATTTCTGCCGCACATGATTTTTGTGATGTGGAATGAAATACAAAACCCACATTTGCAATGTGGAAAGACAAATTCTACTTTTTAGAGAAGACTAAACAAAAGAACAGGGTGTGTGATTAATTATAAAGGGAAACATAATAGCTTGCTGGAGTTGATGTGATCAAGCTTGTTTTTAATTGAATGTTTTTAGCTGTAGTCTTCATGGTTTTTATGCGTGAATTTAAATTTAAATCTTATTTTATCAGGATAGTTAATTAAGTGTATGAAGGGTCATTCACTCTGCAAATGAAGGTTTTTACACCTCTGAATGTTTAACCGTAACAGAGTGCAAATAGGCCTACCTGTGGGCTAATTATAGGTTTTGGAATGGTTCTGCTTTTTTGAATATTTATGTGTACAGTATATTGTGTTTTACTTGTTGCTTTTTTATTTGACA

Function

symbol description
b3gnt3 Enables N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity. Involved in poly-N-acetyllactosamine biosynthetic process. Predicted to be integral component of plasma membrane. Predicted to be active in Golgi membrane.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_06385742_06386887.mRNA False 1497 mRNA 0.41 1 6385742 6387238

Neighbor

gene id symbol gene type direction distance location
CI01000010_06346953_06366547 NA coding upstream 19001 6346953 ~ 6366741 (+)
CI01000010_06324209_06332002 NA coding upstream 52616 6324209 ~ 6333126 (+)
CI01000010_06303382_06311970 NA coding upstream 73464 6302901 ~ 6312278 (+)
CI01000010_06285808_06296322 B3GNT3 coding upstream 89268 6285808 ~ 6296474 (+)
CI01000010_06242353_06250653 CABP4 coding upstream 134420 6242353 ~ 6251322 (+)
CI01000010_06399511_06426913 NA coding downstream 12273 6399511 ~ 6427112 (+)
CI01000010_06484929_06492872 CCDC124 coding downstream 97597 6484835 ~ 6493042 (+)
CI01000010_06502317_06502607 NA coding downstream 115079 6502317 ~ 6502673 (+)
CI01000010_06518667_06544444 KCNN1, KCNN1A, KCNN1B coding downstream 131168 6518406 ~ 6544530 (+)
CI01000010_06555371_06569299 NA coding downstream 168133 6555371 ~ 6569696 (+)
G63534 NA non-coding upstream 115710 6214621 ~ 6270032 (+)
G63519 NA non-coding upstream 131860 6236702 ~ 6253882 (+)
G63518 NA non-coding upstream 175284 6210163 ~ 6210458 (+)
G63517 NA non-coding upstream 175884 6209658 ~ 6209858 (+)
G63514 NA non-coding upstream 183534 6201804 ~ 6202208 (+)
G63533 NA non-coding downstream 53272 6440510 ~ 6440892 (+)
G63585 NA non-coding downstream 129678 6516916 ~ 6518163 (+)
G63578 NA non-coding downstream 151131 6538369 ~ 6626184 (+)
G63588 NA non-coding downstream 170122 6557360 ~ 6607987 (+)
G63620 NA non-coding downstream 323798 6711036 ~ 6719263 (+)
CI01000010_05789479_05790006 NA other upstream 595755 5788332 ~ 5790204 (+)
G63405 NA other upstream 668492 5707971 ~ 5717250 (+)
G63403 NA other upstream 678657 5695445 ~ 5707085 (+)
CI01000010_04640858_04683752 OSBPL9 other upstream 1731749 4640516 ~ 4683778 (+)
G62983 NA other upstream 1936415 4448172 ~ 4449327 (+)
G63572 NA other downstream 198690 6585928 ~ 6617806 (+)
G65803 NA other downstream 2645309 9032547 ~ 9038005 (+)
G65875 NA other downstream 2740072 9127310 ~ 9132112 (+)
G66014 NA other downstream 3131346 9518584 ~ 9519262 (+)
G66037 NA other downstream 3175478 9562716 ~ 9563811 (+)

Expression


Co-expression Network