G114245


Basic Information

Item Value
gene id G114245
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 28217201 ~ 28217422 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU154400
ttttaaaaaccgaattctgtggggatataaaaatgtgacaatataagcagaggttacactagctgttgcatttaaataaaggaggtagaattacagtatattggaaaaaaacgtgattgaaagttgtctgttttgccattgaaacctatggtaatgggtggagttacacagctttctgaaaccgaacagcagggggcgcccgacctgtggtggcttcacttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154400 True 222 lncRNA 0.40 1 28217201 28217422

Neighbor

gene id symbol gene type direction distance location
tox2 tox2,LOC107681298,LOC107666148,LOC106565275 coding downstream 325115 27674707 ~ 27892086 (-)
LOC103038159 cbfa2t2,LOC107681292,LOC107740270,LOC107666150 coding downstream 654179 27513399 ~ 27563022 (-)
LOC103032591 itcha,LOC108431834,LOC108271999,LOC107681287,LOC107666068 coding downstream 832052 27358188 ~ 27385149 (-)
snrpb snrpb,LOC108272150 coding downstream 864750 27347467 ~ 27352451 (-)
ddx27 ddx27,LOC107587605,LOC107681294,LOC107553908 coding downstream 872738 27323869 ~ 27344463 (-)
LOC103034708 LOC108272126,LOC108431801 coding upstream 81272 28298694 ~ 28323285 (-)
kif5a kif5a coding upstream 111301 28328723 ~ 28426989 (-)
mbd6 LOC108431819,LOC107558151 coding upstream 236650 28454072 ~ 28473390 (-)
mars mars coding upstream 275084 28492506 ~ 28515586 (-)
LOC103034067 NA coding upstream 379520 28596942 ~ 28646410 (-)
G114228 NA non-coding downstream 45231 28171679 ~ 28171970 (-)
G114225 stmn3,LOC107566415,LOC107681270,LOC107734610 non-coding downstream 52763 28162922 ~ 28164438 (-)
G114143 NA non-coding downstream 85735 28130319 ~ 28131466 (-)
G114102 NA non-coding downstream 221181 27993938 ~ 27996020 (-)
G114096 NA non-coding downstream 265904 27951020 ~ 27951297 (-)
G114269 NA non-coding upstream 125762 28343184 ~ 28346471 (-)
G114272 NA non-coding upstream 135022 28352444 ~ 28354708 (-)
G114359 r3hdm2 non-coding upstream 598808 28816230 ~ 28829763 (-)
G114380 NA non-coding upstream 630537 28847959 ~ 28848212 (-)
G114401 NA non-coding upstream 713928 28931350 ~ 28931596 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other downstream 87345 28125236 ~ 28129856 (-)
G113888 NA other downstream 1824004 26346140 ~ 26393197 (-)
G113826 NA other downstream 2154917 26032895 ~ 26062284 (-)
ctsa NA other downstream 2530624 25635304 ~ 25686577 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 4200400 24004549 ~ 24016801 (-)
G114270 NA other upstream 130843 28348265 ~ 28361481 (-)
G114304 NA other upstream 365971 28583393 ~ 28584959 (-)
ndufa4l2 ndufa4l2,LOC107385343 other upstream 930014 29147436 ~ 29162803 (-)
LOC103044966 tardbp,LOC108427558,LOC107666995,LOC107713527,LOC107555974 other upstream 1061394 29278816 ~ 29284782 (-)
G114514 NA other upstream 1257424 29474846 ~ 29475567 (-)

Expression


Co-expression Network