CI01000010_07409069_07441868


Basic Information

Item Value
gene id CI01000010_07409069_07441868
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 7408497 ~ 7441868 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_07409069_07441868.mRNA
GACTCTAAAATGGGCTTTGGAATTGCTGTGTCCGGCGGCCGGGACAATCCAAACGTGGAGAGTGGAGAGACGTCCATCATTGTGTCGGACGTGCTGCCAGGAGGCCCGGCCGATGGACTGCTCTTGTACGCTTCGCTCACCTTACTAATGCATATGTGTTTAGCGTATTGTGAGAACGACCGTGTGATACAGGTCAACACCATCACCATGGATAATGTGCCTCATTCTTTTGCTGTGCAGTCACTTCGGAAATGTGGGAAAGTGGCCAAAATAACTGTAAAGAGGCCTCGCAAGGTGTCTGTCCTTAAGCGCCCCCCGTCCCCGAGCGTGGATAGCCGTGATTACAACATATCCAGCTATTATCCCGAGGACAACCGCAGTGTTCACAGTGATCCAGACTCTGATTACCCTCGGGGAAATGGCGGCCTGGGCTACCCCCGCGACAGAGAGCATGACCGCACCCTCGACAAGAGCCGGATAGACTACCTGGACCCAGATTACCGCAGCCAGGACTACACTCGGCGGGAACGGAGTAGAGGCAGGAGCCCAGAGAGATCGCCCAGCTCTGACAGTGGCTACCGCAGGGACGGCAGCCGGGGCCGGACCCTGGAGCGTGGATCCAGCCCGGAGCCTCCCTATCATAAGCAGCACAGTAGAGGTCGCGGGGGAGGAGGAAGCCCTGCTGGAAGCTACGGGAGGGATCAGGGCTACGACACGCGGAGGTATGACACTCGTTCGGATGACAAGATGATCAGGAGTCACAGCAGGGACCGGCTGCAGGATCACTCACCGTCACCTAGCAGAGAACGGGACAGAGGAAGAGACCGTCCTAACTATGAGCCCCTCGAGCCGCCCATCAATGTGATGCTGGTGAAAAACAGGCCCAATGAAGAGTACGGCCTCCGGCTGGGCAGCCAGATCTTCATCAAAGAGATGACCAGCACTGGACTCGCTGCCAGAGATGGAAATCTCCAGGAGGGCGACATCATTCTCAAGATCAACGGAACGGTGACCGAGAACCTCTCTTTGAGTGACGCCGGCAAGCTGATTGAAAAATCACGGGGCAAGCTGCAACTGGTGGTCCAAAGAGACCACCGGCAGATCCTGGTGCGCATCCCTGCCCTGGCAGACAGCGACTCGGAGCCTGACGGGCGATGCTTCATTTTCCTTGCTCTGCGTCTTATTGGTTTTACTTGTAATCAAATAATTCTCAACTACCCTGGACAAAATATTTCTGAGATGGAGTCGTACCATTCCTACTCACCTCAAGATGACCAAAGGTCACGTCAATCTGACCTCTCCTCACACTCTTCTAATGACGCTGCACGAGAGAATGCCAGGGAGGACCCTCAAAGCAGACTTGCAAAGCCCATTGTAACATCCTCTCCTTACAAAACTCCAGAGGTACTGCTTCCAGCCCAGGAGGAGAGAGCAGAACCACAGGAAGAAGAGCCACCACGTAGGAACAGTTGTGATGAATTAGATGAATTATGGTTTGATACCCTCTGGCAGAGGATTGGCAATACTCCAGCATTAAGGACGACACCCAAGATCCTGCTGAGACCGAGCCCAGAGGACGAGGCCATTTACGGCTCCTCCATATTCATGAGGAAGAGGCAGTCTGCTGCTGCTCTTATCCACTGGGAGAGGCCCAACACAGTGATGGTGAGCTTTCAGAAAGGAGAGAGTGTTGGACTGAGGTTAGCTGGAGGAAATGATGTGGGAATATTCATAGCAGGAGTGCAGGAGGGCAGTCCGGCTGAAGAAGAAGGTCTCCGTGTAGGGGATCAGATCATGAAGGTGAATAACGTTGACTTTCGGGGCATTGTGCGAGAGGAGGCCGTGCTGTTCCTGCTGGAGATCCCGCGGGGTGAGGTCGTGACCATTTTGGCACAGAATAAAACCGAGGTTTACGAAGACATCTTGATATCCGGTCGAGGGGACTCGTTTTTCATCCGGACCCATTTTGAGTATGAGAAGGAGCTGCCTCAGTGTCTCGCCTTCTCGCGGGGCGAGATCCTCAAGGTGGTGGACACCTTATATGACGGCAAGCTGGGAAACTGGCTGGCCATCCGCTTGGGCAAAGACAACCAACTGCTGGAGAAAGGCATCATTCCCAACAAGAGCAGAGCGGAGCAGATGGCAAATGTCCAGAACACACATAAGGGCTCAGGAAGTGACAGAGCCGACTTCTGGAGACTACGTGGTCAGAGGGCGGCCAAGAAGAAAGACCTGCGGAAGAGCCGAGAGGAGAGTTCTGCTGCCGTCGCCACACGATTCCCTGCCTATGAGAGGGTGGTGCTGAGAGAAGCGGGATTCCGAAGGCCGGTTGTGCTGTTTGGACCAATCGCTGATGCTGCCAGCGAAAAACTGAAAGCGGAGCTTCCAGATGAGTTTGTAATTGCCAAAACAGAACCCAAAGACGCAGGGTCGGAAAAATCCTCCGGGGTGGTTCGTCTCAACACGATTCGACAGATCATCGAACAGGACAAGCACGCTCTCCTGGACGTCACCCCTAAAGCTGTGGACACCCTGAACTACACGCAGTGGTACCCCATAGTCATCTTCTTCAGCCCGGATAGCAAACATGGGGTGAAGGCGATGAGACAGAGAGTCATCCCCAGCTCTAACCGCAGTGCCCGCAAACTCTACGATCAGGCTCTGAAGCTCAGGAAAACCTGCTCACACCTGTTTACCGCTGTTATCGATCTGAACTCGGCTAATGATGCCTGGTACGGCAGTTTGAAGGAGACCATACGAGACCAGCAGACCCACGCTGTGTGGGTCTCGGAGGGGAAGCTGGACGGGACGGAGGGGGACCTTGATGTTCATGACGACCGCATGTCGTATCTCTCGGCGATGAGCGCTGACTATCTCAGCATGGACAGCCGGCTGACCAGCGACTACGAAGACACGGCAGACGAGGCCGGGACTTACACAGATAATGAAGCGGACGAGCCGCTCGACCGCCAGCGGGTGTCGGCCATTAGCCGCTCCTCTGAGCCAGTCATGCCAGAGGAGATCCTCAGGAAGTCCAGCCCAGAGATTCGAGGTCGTATCCGCAGAGTGGGCAGCAGAGAGATGCTGACTGAGGCTAGTCCCCCCTTCATGTCCACCTTCCTGCCTGACCCCGTGAAGGTAAAAATGCTGTCTCAAGTCGAAGTGACGCGGGGGCAGTACGACCCCTCTCGAAACTACGACTCTCGTTCAAGCAGCCCCGCAAGCAGCGAGCACCCGCGCAGCCAGGACTCTCCGGCAAAAAACAAGCCCCTGCCTCCCCCACCAGCACTCAAACCTAACTTCGCGTCCCGCAGCTCCAGAGGCCTCGTAAACAGCCCCCCGATACGGGACAGTGAACCCCTGGTGGACAGTCCTGACGATCCTTCTCAGAGGTCTTTCCGGGGCAAAGTGAAGGCCTTCGAGCAGATGGATCACTTCGCCCGGACACAAAGAGTTCTGGAGATCCAAGAGGCCCAGAACGCCAGGTTGGAGATTGCTCAGAAACATCCAGACATCTATGCCGTCCCCATGAAGTCTCAGAAACTGGACCACAGCAGGCCACAGCCTATCGGCTCCAGTGCGCGACCAGAGCCCCAGACGCCTCCTTGCAAGCTGCCATACACAGAGAGCCGCCCGCTCGGCCTTGGCGAGGAGCCCGGGGAGGAGTTTCGACAGCAGCTGGCGGATCAGACCAAGCGCGGCTATTACACCACCACACAAAAGTATCAGGACACTGAGCTGTAGAGTTCCTCTGCTTCGGCTCACCGCACAGCTTCACCATTCCACCGGGGCGCCGCCCTGCACCAAAACTGCTGCTGACTTGGAAGTCCCATTTGCTTTTAAGTTTCCCACGCGTATATTTGTCTTTTTCACTTCAAAGAAGTTCAACTTTCTGTCCGTGTGGATAGAATCTTATTTTTTTTTATATATATATATTTGCATTTTTGTTTCCTTCTGTGTGATTCCAGAACCATGTTTTCTTGCCTATGCAATTTTTTCAGTTTCTGCAACGCTACAGAAACGTCTCGCCACGAGTGTCTCTCTCTCTCTCTTCGCTCCATGAAAACCTTAAACCTGTCGTGTGCTACAAACCAGCTTTTTGTTACTTTCTTTTTATAAGCCTGAAGCAAAACTGTTTTAAAACGTCACTCTCTTTAAGGTTTATACTATCTTTGCATTCCTTCATTTCTGATCATGTGTGTTATACGATGTAAGACAATACACTGGATTTTGTTACAACATTTTGAAGTGCCTTTTACTTTACAAATAATGTTGGAGGTTTGTGGACTTGACAATCCAGCCCTCTGGACAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_07409069_07441868.mRNA True 4316 mRNA 0.54 23 7408497 7441868

Neighbor

gene id symbol gene type direction distance location
CI01000010_07347866_07367517 IFT81 coding downstream 40708 7347823 ~ 7367789 (-)
CI01000010_07342174_07344454 NA coding downstream 63452 7342174 ~ 7345045 (-)
CI01000010_07337002_07341920 NA coding downstream 66577 7336613 ~ 7341920 (-)
CI01000010_07320443_07334877 ATP2A2.S, ATP2A2B, ATP2A2A, ATP2A2 coding downstream 73504 7319816 ~ 7334993 (-)
CI01000010_07135276_07196633 NTNG2A, NTNG2 coding downstream 211864 7134391 ~ 7200800 (-)
CI01000010_07503276_07509080 NA coding upstream 61031 7502899 ~ 7509475 (-)
CI01000010_07528012_07533124 FXN coding upstream 85822 7527690 ~ 7533124 (-)
CI01000010_07758998_07771497 BRPF3, BRPF3B coding upstream 316554 7758422 ~ 7771822 (-)
CI01000010_07775590_07780861 NA coding upstream 333536 7775404 ~ 7781172 (-)
CI01000010_07784276_07792092 MK13, MAPK13 coding upstream 342408 7784276 ~ 7792092 (-)
G65264 NA non-coding downstream 17868 7389960 ~ 7390629 (-)
G65246 NA non-coding downstream 61016 7347194 ~ 7347481 (-)
G65238 NA non-coding downstream 61829 7345614 ~ 7346668 (-)
G65364 NA non-coding downstream 133385 7274411 ~ 7275112 (-)
G65359 NA non-coding downstream 137914 7270219 ~ 7270583 (-)
G65248 NA non-coding upstream 5788 7447656 ~ 7454020 (-)
G65391 NA non-coding upstream 68366 7510234 ~ 7510746 (-)
G65427 NA non-coding upstream 187447 7629315 ~ 7630306 (-)
G65453 NA non-coding upstream 217567 7659435 ~ 7672343 (-)
G65482 NA non-coding upstream 326639 7768507 ~ 7808769 (-)
G64918 NA other downstream 1312017 6093689 ~ 6096480 (-)
G64877 NA other downstream 1491486 5916257 ~ 5917011 (-)
G64564 NA other downstream 2165571 5049155 ~ 5242926 (-)
CI01000010_04612793_04613017 SMIM15 other downstream 2794941 4612460 ~ 4613135 (-)
G64237 NA other downstream 3172081 4229950 ~ 4236416 (-)
CI01000010_07880416_07900104 NA other upstream 400768 7880375 ~ 7900104 (-)
G67099 NA other upstream 1199822 8641690 ~ 8674897 (-)
CI01000010_11929215_11933223 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 4487093 11928448 ~ 11933343 (-)
CI01000010_11965317_11969111 NA other upstream 4522997 11964865 ~ 11969710 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location