CI01000010_07342174_07344454


Basic Information

Item Value
gene id CI01000010_07342174_07344454
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 7342174 ~ 7345045 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_07342174_07344454.mRNA
ATCGTTTACCTGCGAGTTCACCTGCATTGGAGGGGCGGGGCAAAAGTTATATCAGCTGCATTGAGTGACAATCTGTTATACCAATAAACAAACGTCTGCTCAATATACGTCAGTGCTGCCCTAGCCAGAGTCGGTTGATTGGATGTTGATGGGCTCCCTGAGCACTCGCTGTCCAATCAGCGTCCTCCACATGCGGCAGAGAGGCAGTAGTGAGTCTCCTGCGATAAAACGAGTAAACGCCGCTTCCATCACCACTGAACGGGAGAGAAGCACGGCGAAACGGGTCGACCGTCACATTTCCAGGCAGGCAGAGGCTTGGACGAGGGCTGAGTGTGATGTACTAAGCAAGGATCTTTTCATTTGGCTTCCACCGATTCCCAGTTCTTTGGGAAACAAGAAGAAGATAGAAGAACTCTGTTTGGATAAGACTATTGGAAGGTGCATTTGCCCGTCTCAACTTTCCACATGTTCTTCATTGTGTCCCATTGGATGTGAATGTATGTGTCACTCATAGGCATATTCGTATCTATTTTTATTTTTTATTTTTGACCAAGGCAGATATCTTGAGCGGGATTCTATTCCAGTCTAACCATGGAGAACGCTCACATCAAGAGTGTGGAAGAAGTTTATAGTTATTTCAGCGTCAACGAGAGCACGGGACTGACTTTAGACCAGGTGAAAAAGCAGAAAGAAAAATGGGGTCTCAACGGAAAATCTATATGGGAACTTGTTTTCGAGCAGTTTGAAGATTTACTTGTGCGGATTCTTCTACTGGCAGCTTGTATATCTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_07342174_07344454.mRNA True 792 mRNA 0.45 2 7342174 7345045

Neighbor

gene id symbol gene type direction distance location
CI01000010_07337002_07341920 NA coding downstream 254 7336613 ~ 7341920 (-)
CI01000010_07320443_07334877 ATP2A2.S, ATP2A2B, ATP2A2A, ATP2A2 coding downstream 7181 7319816 ~ 7334993 (-)
CI01000010_07135276_07196633 NTNG2A, NTNG2 coding downstream 145541 7134391 ~ 7200800 (-)
CI01000010_07128701_07132022 ENDOG coding downstream 210106 7128662 ~ 7132068 (-)
CI01000010_07051047_07053923 NA coding downstream 288251 7050793 ~ 7053991 (-)
CI01000010_07347866_07367517 IFT81 coding upstream 2778 7347823 ~ 7367789 (-)
CI01000010_07409069_07441868 NA coding upstream 63452 7408497 ~ 7441868 (-)
CI01000010_07503276_07509080 NA coding upstream 157854 7502899 ~ 7509475 (-)
CI01000010_07528012_07533124 FXN coding upstream 182645 7527690 ~ 7533124 (-)
CI01000010_07758998_07771497 BRPF3, BRPF3B coding upstream 413377 7758422 ~ 7771822 (-)
G65364 NA non-coding downstream 67062 7274411 ~ 7275112 (-)
G65359 NA non-coding downstream 71591 7270219 ~ 7270583 (-)
G65336 NA non-coding downstream 74098 7237333 ~ 7268076 (-)
G65238 NA non-coding upstream 569 7345614 ~ 7346668 (-)
G65246 NA non-coding upstream 2149 7347194 ~ 7347481 (-)
G65264 NA non-coding upstream 44915 7389960 ~ 7390629 (-)
G65248 NA non-coding upstream 102611 7447656 ~ 7454020 (-)
G65391 NA non-coding upstream 165189 7510234 ~ 7510746 (-)
G64918 NA other downstream 1245694 6093689 ~ 6096480 (-)
G64877 NA other downstream 1425163 5916257 ~ 5917011 (-)
G64564 NA other downstream 2099248 5049155 ~ 5242926 (-)
CI01000010_04612793_04613017 SMIM15 other downstream 2728618 4612460 ~ 4613135 (-)
G64237 NA other downstream 3105758 4229950 ~ 4236416 (-)
G65453 NA other upstream 318646 7659435 ~ 7672343 (-)
CI01000010_07880416_07900104 NA other upstream 497591 7880375 ~ 7900104 (-)
G67099 NA other upstream 1296645 8641690 ~ 8674897 (-)
CI01000010_11929215_11933223 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 4583916 11928448 ~ 11933343 (-)
CI01000010_11965317_11969111 NA other upstream 4619820 11964865 ~ 11969710 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location