CI01000010_07128701_07132022 (ENDOG)


Basic Information

Item Value
gene id CI01000010_07128701_07132022
gene name ENDOG
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 7128662 ~ 7132068 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_07128701_07132022.mRNA
ATTTTATTTAGATAAATTAATTAACTCTATCTATTAAACGTAAACGATGCATCGTGTTTTCTGCTCGCGGTGGGTTTTATCCGGGCTGTCACTGACAGCTGGCATAGGCATCGGCGCCACCTTGACAGCAGCCAGGGACACGAGCCACAGGGGTGGACTGCTGGACCGCGTGCCGGTCATCCCGATACCGAGCGTCGACGCAGCGTCAGAGATCAACACGTACCAACCGGGACAGGTCGCTGTAAGCAAATCTACAGCTGTGATGAAGTACGGCTTCCCTTCCCTGTCCAACATCAAGAGCAGAGAGTCTTACGTAACCTCATACGACCCCAGAAACAGGACTGCAGCGTGGGTTATAGAGCAGCTCAACGTCGAGACGATAACCGGGACATCGGACAGAAAGTTCTGTGATTTTAAAGAGGACGACTCGGTTCATGTTTACCACAGATCGAGCAATGCTGATTACAAGGGTAGTGGGTTTGACAGGGGTCATCTGGCTGCAGCAGCCAATCACAAGTGGAGCCAGAAAGCCATGGATGACACCTTCTACCTGAGCAATGTGTCGCCACAGAATCCCCATTTAAACCAAAACGCATGGAATAACTTGGAGAAATATTGTCGCTCTCTCACCAAGCATTACCAGAATGTCTTTGTGTGCACTGGACCACTCTACTTGCCCCGACAGGAACCTGACGGGAAAATGTATGTGAAGTATCAGGTTTTGGGAAAGAACCATGTAGCTGTGCCGACTCACTTCTTTAAGATTGTGATTCTGGAAAAGCCAAGAGGAGACGTGGAGCTGCGCTCCTATGTGATGCCCAATATGCCAGTTGATGAAAAGATCCCACTGGAACGCTTCCTGGTCCCCATTGAGAGCATCGAGAGAGCGTCCGGACTGCTGTTCGTACCAAACATCATGAAGAGGACCAGTGGTCTGAAAGCCATTACTGCAGGGCCATGATGAGTTTACAGTGATTACTGAGGGGGAATGGAAAATAAA

Function

symbol description
endog Predicted to enable endoribonuclease activity and single-stranded DNA endodeoxyribonuclease activity. Predicted to be involved in apoptotic DNA fragmentation. Predicted to be active in mitochondrial inner membrane and nucleus. Orthologous to human ENDOG (endonuclease G).

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01173 ENDOG; endonuclease G, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_07128701_07132022.mRNA True 1000 mRNA 0.50 3 7128662 7132068

Neighbor

gene id symbol gene type direction distance location
CI01000010_07051047_07053923 NA coding downstream 74739 7050793 ~ 7053991 (-)
CI01000010_07013266_07023918 NA coding downstream 102329 7013080 ~ 7026333 (-)
CI01000010_06704532_06716191 KIF2A coding downstream 412471 6704422 ~ 6716191 (-)
CI01000010_06690142_06698430 CEPT1A coding downstream 430120 6689995 ~ 6698542 (-)
CI01000010_06681043_06685375 NA coding downstream 443287 6680763 ~ 6685375 (-)
CI01000010_07135276_07196633 NTNG2A, NTNG2 coding upstream 2323 7134391 ~ 7200800 (-)
CI01000010_07320443_07334877 ATP2A2.S, ATP2A2B, ATP2A2A, ATP2A2 coding upstream 187748 7319816 ~ 7334993 (-)
CI01000010_07337002_07341920 NA coding upstream 204545 7336613 ~ 7341920 (-)
CI01000010_07342174_07344454 NA coding upstream 210106 7342174 ~ 7345045 (-)
CI01000010_07347866_07367517 IFT81 coding upstream 215755 7347823 ~ 7367789 (-)
G65201 NA non-coding downstream 122414 7006043 ~ 7006248 (-)
G65189 NA non-coding downstream 142837 6980270 ~ 6985825 (-)
G65177 NA non-coding downstream 175917 6952338 ~ 6952745 (-)
G65132 NA non-coding downstream 179655 6947391 ~ 6949007 (-)
G65336 NA non-coding upstream 105265 7237333 ~ 7268076 (-)
G65359 NA non-coding upstream 138151 7270219 ~ 7270583 (-)
G65364 NA non-coding upstream 142343 7274411 ~ 7275112 (-)
G65238 NA non-coding upstream 213546 7345614 ~ 7346668 (-)
G64918 NA other downstream 1032182 6093689 ~ 6096480 (-)
G64877 NA other downstream 1211651 5916257 ~ 5917011 (-)
G64564 NA other downstream 1885736 5049155 ~ 5242926 (-)
CI01000010_04612793_04613017 SMIM15 other downstream 2515106 4612460 ~ 4613135 (-)
G64237 NA other downstream 2892246 4229950 ~ 4236416 (-)
G65453 NA other upstream 531623 7659435 ~ 7672343 (-)
CI01000010_07880416_07900104 NA other upstream 710568 7880375 ~ 7900104 (-)
G67099 NA other upstream 1509622 8641690 ~ 8674897 (-)
CI01000010_11929215_11933223 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 4796893 11928448 ~ 11933343 (-)
CI01000010_11965317_11969111 NA other upstream 4832797 11964865 ~ 11969710 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035488 endog coding NC_007119.7 CM002892.2 12118097 ~ 12122228 (+)