G61105


Basic Information

Item Value
gene id G61105
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 805070 ~ 805362 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU69603
ATGACATGCATCTTTGAGCTGTTTTAGAGAACTGGTTGGGTCATTGGTTGATCTAATGCTTTACATTCCCCTGAATACATTAGTGAAATTCAGGATTCACCTGCAAAATTCATCAATTCAGGACACATTTACAAAAGTATAATAGAAATGTATAGATAATATACTTGTATATACACATTGTGATAACTAGGTCAACCATTTTGCATTTAATGACTTGTGCGATGAACTAATGACTAGATGTTTTGGGGGGTAAGACTATTCAACAGAGAACCATATAATACATTTTGAGCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69603 True 293 lncRNA 0.33 1 805070 805362

Neighbor

gene id symbol gene type direction distance location
CI01000010_00691767_00731442 MAGIXA, MAGIX coding downstream 73628 691767 ~ 731442 (-)
CI01000010_00653231_00678240 NA coding downstream 125377 653185 ~ 679693 (-)
CI01000010_00601570_00615159 IQSEC2 coding downstream 189911 601570 ~ 615159 (-)
CI01000010_00553512_00562038 NA coding downstream 243032 553413 ~ 562038 (-)
CI01000010_00532752_00544586 CSDE1 coding downstream 260484 532617 ~ 544586 (-)
CI01000010_00810923_00813645 NA coding upstream 5085 810447 ~ 813870 (-)
CI01000010_00861290_00870510 NA coding upstream 55118 860480 ~ 871146 (-)
CI01000010_00902754_00903080 NA coding upstream 97155 902517 ~ 903230 (-)
CI01000010_00929453_00930078 NA coding upstream 123699 929061 ~ 930537 (-)
CI01000010_00952202_00958971 PTK6 coding upstream 146530 951892 ~ 959383 (-)
G61104 NA non-coding downstream 658 804195 ~ 804412 (-)
G61098 NA non-coding downstream 15580 789195 ~ 789490 (-)
G61075 NA non-coding downstream 21548 780807 ~ 783522 (-)
G61043 NA non-coding downstream 208385 596126 ~ 596685 (-)
G61055 NA non-coding downstream 219983 584816 ~ 585087 (-)
G61115 NA non-coding upstream 33100 838462 ~ 840123 (-)
G61117 NA non-coding upstream 35399 840761 ~ 844440 (-)
G61127 NA non-coding upstream 80579 885941 ~ 890832 (-)
G61085 NA non-coding upstream 86965 892327 ~ 932153 (-)
G61076 NA non-coding upstream 139846 945208 ~ 947575 (-)
G61045 NA other downstream 229559 572753 ~ 575511 (-)
G61888 NA other upstream 439107 1244469 ~ 1246018 (-)
G61965 NA other upstream 619063 1424425 ~ 1545051 (-)
CI01000010_03527436_03530341 NA other upstream 2724308 3527408 ~ 3530359 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other upstream 3084707 3890069 ~ 3899058 (-)
G64237 NA other upstream 3424588 4229950 ~ 4236416 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G390783 NA non-coding CI01000208 null 228514 ~ 242700 (-)
rainbow trout (Oncorhynchus mykiss) G394297 NA non-coding NC_048569.1 CM023223.2 35254791 ~ 35255120 (+)