fam214a (fam214a)


Basic Information

Item Value
gene id fam214a
gene name fam214a
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 36260915 ~ 36323083 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022679412.1
ATGAGGAACGGAGAGGGTCGCAGGAACCCTGAAAACGTCCAGACCAATCAGCTTTTTAGTGAACGCCTCCAGCTGATCCAGAGCAGAAGGACTCGGCCTGTTTTGTCTTGCTGGCTCGTGCAGGTCAGTGAGGCTCTGAATAGCACTGCCGGGATGgTGCCTGAGGCCAATGGATGTTTTGTGTTCTGCAGGAGTGGTGATCGTTTTATTGAGGAGAAAACTCTTCTACTGGCTGTTCGCTCCTACGTCTTTTTCTCGCAGCTGAGCGCCTGGCTCAGTGCCTCTCACGGCATCGTCCCCAGAAACATCCTTTACAGAATAAGTGCAGCTGATGAAGAGCTTATATGGAACTTCTCCCAGACCCCCTCTGAGCATGCCTTCCCCGTACCCAATGTGTCCCACAGTGTGGCTCTTAAGGTGCGGGTCCAGTCACTGCCCCGCCAGCCCAAATACCCCGTTCTTAAATGCAGCATCCACTCTGGCCTGACCTTCTTGGGTAAGCGAACCTTCGACCCTGGAGATGCAGCATACCGTCGACTCGAGCCAGTCGGAGACCCTCCGAACCCTCTCCGTCTACAGGGATCCCCTCTGTTCTGCAGATCTCTACATTCCCCACTGCCTACCCAATGCAACAGTAACACCCCTCTTAATCCTCAGAAAAGCAGCAGCCCCCTGAACCCCCGCAAATGCCCCCAGCGCCCAGAGTCGCCCGTCCCACCCAACAAAGCTGTAAAGTGGCTGTACTCTCGAACCAGCAATGGCTTGGGTGTGCCACCGTCATCCGAAGTCTACAGCTCCTGCACTAATGGGGCGGAAAGCCTGGCAAAGACAGAATCGTCTCCCATACGCGGATTCAAATCTCTCTCGCTCATTGATCCCTCTGGCTCTCCCAGCTCAAGTCCCCGCCCCACTTCAGGGGGTGAAAAACCTCTGATTGGTTCTCTGCTTCAGGAAAGACAAGAAGTCATTGCCCGCATTGCTCAGAGGCTTAACTTCTGCGATCCTACAGCGCCGCACCTGCCAGACGCTCTTTTCTCAGCACCTTGCGACCCGTTGGCACCCAAAACACCCTGGAACTCTTCTACCAGGGATGAGGGGCTGTTCAAAAAGACCAAAGACCCAAGTATCTCTTGCCCAATCCCACAGACACATGAAAGAACTGGTCCAGAGGACCCCGAGCACCTAGAGCCCCCGGGCTACCCAGAGAGGAGCCGGACTTCTCTCTTACGCACTCCGCTCAGTCCCAGGAGCCGAGCAAGGGCGGACCAGGCCGACTCGGCAGAGTCCGGGACCTCCGGCCAAACCACAACCTGCCGGAGGCTGCTGTTGACTGATCCGAAGGAAGGGTCTTTGATAGCAGAAGCCGTGCAGGATATTTCACGGCTAATCCAGGAGAGGCTCCAACAATCCCAAGAGCTCCTGCACTCTACCTACAAGCTGTGCCATGAGCCATCGACCACCAAACCTTCCACAAACAACCAGAACCAAGGCCAGAACCTCCAGAGTCACCAGAAACAGAACAGCCAGAAGCAGAACTATCAGCTAAGTGGCAGCAACACTGGCTGTGCTAGCCAAGCTAACGGCATCGTCTTCCCACCCCATCCCAAATCCACCACAGATGTTTCCAATGGCGACTTGAGCACAGACCCTTACATTTGCACAGATGCCAGAAGAAGGAGTGATTCTAGGTCTTCGAGTGCTGCCTGCTCCAAACCTGAAGAGCCTATCATTGTTAAAGCAAGAACGCTAATGCAGACCAGTCACCAACATGCACACAATGCCAAAAATGAGCCCTGGAACTCTTTCATCAACACCACCAGCCCCAAGACCTCCCGTAGGTTCAATGGGGCGATCCGGGCTGAAGACTTGCGAGCCCAGAGCAGACAGGAGGAAATGCGtgggagaagaggagagaagcaTAGCCAAGCCAAGTCCACCATGTGTGGGCAAAATGAAAATCAGGACCCCTGGGCTTCTCTGTCCAGTACACCTACAAGCCTTACCCAACGAACCCCAAGCCCCGACTCAGCCCATAGCAGCACCGCACACACCCGCTGGTGAAGAAGCCCCGCCTCCCCACTGAAGCCATGCAGTAATTGGAAGAAGCAGAACAGGCACTCTATCGACGGAACGGCAACCAAAGCCTTCCACCCATGCACCGGCCTGCCCTGCTCTCCAGTTCCACAGAGGAAGAGCCAGACGGGTTACTTTGATTTAGACACGTCTCTGCTGCGCTGCAAAGGAGTGCCATGGGCTGCCAGCAAGAGaatgtgtCTGAAGAAGACTGAAGATGCAGATGAACCTCAGCAGCTCTTGAGTGCCAGCGCCCCGCCCGCCAGTCTCAGCCTTCTGGGAAACTTTGAGGAGTGTGTTCTGAACTATCGTTTGGAGCCGCTGGGCACAGTGGAAGGGTTCACTGCTGAGGTCGGCGCCAGTGGAAGTTTCTGCCCCAGTCACATGACCTTCCCAGTGGATGTGTCGTTCTACAGCGTCTCAGACGATAACGCTCCTTCCCCGTACATGGGTGTCATAAACCTGGAGTCACTGGGTAAAAGGGGCTACCGTGTGCCTCCATCAGGAACAATTCAAGTGACCTTATTCAACCCCAATAAGACGGTGGTGAAGATGTTTGTGGTGATGTATGACCTGAGGGAAATGCCATCCAGCCATCAGACATTCCTGAGGCAGAGGACCTTCTCCGTCCCCGTCAAACGTGAATCCAACGGCCACAACAACAAGAAGCCCCTCACCTCGCTGGGACAGGGGCGGACCCTGCGCTACCTCATTCACCTGAGgTTCCAGAGCTCCAAATCTGGAAAGATCTACCTCCATCGGGACATCCGGCTTCTGTTCTCACGCAAATCCATGGAAGTGGACAGTGGTGCTGCCTACGAACTCAAATCCTTCACAGAGTCGCCAGCCGACCCCCCCTTCTCAGCCAGATGCTAATCCAATCCCACAGTCCATCTGATCTGACCTAATGTAATCTCACTCCAGCGTAGGGGCCTTACTCAATCACAATCCCTCTTATTTTTGCTTGTAAgggaaatttaaagaaaaaaaagatagatttactcccacacacaaacacacacatgcagtctAATGGCCACATTTCCTCTGaagatgaataataaaataaaaagtgaagaacaagaaaaaaagaacaaaacctGCATCATCAGATCATCGGTGCTTCATTGTCCCAGCGATTTACAGCAGCGGacagttttctctcttttttttttttttttttttttttgacaaattttgttgctgttttgaagcTCGTTTTCAGAGCTTTGGTGCAGTTTTGCAAAGAGAGAATATActgaagtgaaaaaaaatacaacaacacggaccattttattttctaatgacaagaagaaataaataaattacaaaaaaaaaaaacaagtgaatcaACCCTGAAAGAATAAATGACTTTGGATAGAGCACTGTGTACCTCCACCAGAACTGGAAAAGAAAT

Function

symbol description
fam214a Orthologous to human FAM214A (family with sequence similarity 214 member A).

NR:

description
PREDICTED: protein FAM214A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022679412.1 True 3490 mRNA 0.52 16 36260915 36323083

Neighbor

gene id symbol gene type direction distance location
pigb pigb coding downstream 78648 36170644 ~ 36182267 (-)
sdr42e1 sdr42e1 coding downstream 278847 35976180 ~ 35982068 (-)
wtip wtip,LOC107600421,LOC107594378 coding downstream 290408 35925563 ~ 35970507 (-)
kiaa0355 kiaa0355,LOC102798860 coding downstream 374300 35811994 ~ 35886615 (-)
LOC103025397 LOC108431712,LOC107668485,LOC107712581,LOC107734866,LOC107659171,LOC103379346,LOC105892636 coding downstream 483555 35617599 ~ 35777360 (-)
LOC103044212 kpyk,LOC103044212,LOC108432067,LOC107712845,LOC108264538,LOC106587214,LOC107665073,LOC107595343 coding upstream 1086904 37409987 ~ 37442960 (-)
LOC103042980 LOC108432642,LOC102311314,LOC102789927,LOC106562120,LOC101080058,LOC103046663 coding upstream 1641248 37964331 ~ 37976276 (-)
LOC103023582 chst1,LOC108432931 coding upstream 2345630 38668713 ~ 38671899 (-)
LOC111194821 LOC108411626 coding upstream 2502240 38825323 ~ 38835978 (-)
LOC103036953 NA coding upstream 2826960 39150043 ~ 39171591 (-)
G162886 NA non-coding downstream 23779 36234863 ~ 36237136 (-)
G162881 NA non-coding downstream 31052 36228746 ~ 36229863 (-)
G162834 NA non-coding downstream 139703 36118887 ~ 36121212 (-)
G162833 pygo1 non-coding downstream 142933 36116789 ~ 36117982 (-)
G162826 NA non-coding downstream 150535 36105401 ~ 36110380 (-)
G162906 NA non-coding upstream 1407 36324490 ~ 36325797 (-)
G162905 NA non-coding upstream 8469 36331552 ~ 36332704 (-)
G162913 NA non-coding upstream 65126 36388209 ~ 36388594 (-)
G162924 NA non-coding upstream 175960 36499043 ~ 36499666 (-)
G162928 NA non-coding upstream 221370 36544453 ~ 36544769 (-)
c18h15orf65 NA other downstream 120018 36138903 ~ 36140897 (-)
LOC103026784 thsd7a other downstream 1529843 34400663 ~ 34731072 (-)
LOC103042403 slc25a32,LOC102777849,LOC107756894,LOC107726671,LOC107688281 other downstream 2145513 34097928 ~ 34115402 (-)
tap1 NA other downstream 3585646 32651968 ~ 32675269 (-)
LOC103042221 LOC105901649,LOC107568871,LOC105028370,LOC108413244,LOC567622,LOC103367052,LOC107379323,LOC100706402,LOC101466533 other downstream 5479207 30699170 ~ 30781708 (-)
onecut1 onecut1 other upstream 16297 36339380 ~ 36354701 (-)
G163230 NA other upstream 1555732 37878815 ~ 37879415 (-)
LOC111194721 NA other upstream 1658013 37981096 ~ 38024333 (-)
G163591 NA other upstream 3104765 39427848 ~ 39428541 (-)
G163627 LOC108443054,LOC108263931,LOC108265089 other upstream 3167699 39490782 ~ 39493278 (-)

Expression


Co-expression Network