G162913


Basic Information

Item Value
gene id G162913
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 36388209 ~ 36388594 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU220677
ttttccacattgtttacacacaaaatgtggaactatgcacacaaatccaaaaacatgaagctcatgtgtcgacattgtgactccaaactgctaaactctaaacacaattttatatgttctcactcaaatatcattctaaatcacagctttgcaaatcgctaaacacaaactgcatcATTTAGAACACCTTGCTCACCTGAGAATCACTGACCTCCAAATACAAAACTCTAATTACCAAGTAGTCTCACACAAGTTACAGCTATGTAAACTTAATTAGAAGAACGTTTCAATCATTTGTCAGAGTATAAAAGAGGCCTCACGTGACTGATACAGCCATACTATGTTGTCATCTGGGATAATGTAAGTTTCCACCGGGCAGCTCTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220677 True 386 lncRNA 0.37 1 36388209 36388594

Neighbor

gene id symbol gene type direction distance location
fam214a fam214a coding downstream 65126 36260915 ~ 36323083 (-)
pigb pigb coding downstream 205942 36170644 ~ 36182267 (-)
sdr42e1 sdr42e1 coding downstream 406141 35976180 ~ 35982068 (-)
wtip wtip,LOC107600421,LOC107594378 coding downstream 417702 35925563 ~ 35970507 (-)
kiaa0355 kiaa0355,LOC102798860 coding downstream 501594 35811994 ~ 35886615 (-)
LOC103044212 kpyk,LOC103044212,LOC108432067,LOC107712845,LOC108264538,LOC106587214,LOC107665073,LOC107595343 coding upstream 1021393 37409987 ~ 37442960 (-)
LOC103042980 LOC108432642,LOC102311314,LOC102789927,LOC106562120,LOC101080058,LOC103046663 coding upstream 1575737 37964331 ~ 37976276 (-)
LOC103023582 chst1,LOC108432931 coding upstream 2280119 38668713 ~ 38671899 (-)
LOC111194821 LOC108411626 coding upstream 2436729 38825323 ~ 38835978 (-)
LOC103036953 NA coding upstream 2761449 39150043 ~ 39171591 (-)
G162905 NA non-coding downstream 55505 36331552 ~ 36332704 (-)
G162906 NA non-coding downstream 62412 36324490 ~ 36325797 (-)
G162896 NA non-coding downstream 113698 36273786 ~ 36274511 (-)
G162886 NA non-coding downstream 151073 36234863 ~ 36237136 (-)
G162881 NA non-coding downstream 158346 36228746 ~ 36229863 (-)
G162924 NA non-coding upstream 110449 36499043 ~ 36499666 (-)
G162928 NA non-coding upstream 155859 36544453 ~ 36544769 (-)
G162939 NA non-coding upstream 263035 36651629 ~ 36651868 (-)
G162940 NA non-coding upstream 275727 36664321 ~ 36664581 (-)
G162955 NA non-coding upstream 304333 36692927 ~ 36693189 (-)
onecut1 onecut1 other downstream 33508 36339380 ~ 36354701 (-)
c18h15orf65 NA other downstream 247312 36138903 ~ 36140897 (-)
LOC103026784 thsd7a other downstream 1657137 34400663 ~ 34731072 (-)
LOC103042403 slc25a32,LOC102777849,LOC107756894,LOC107726671,LOC107688281 other downstream 2272807 34097928 ~ 34115402 (-)
tap1 NA other downstream 3712940 32651968 ~ 32675269 (-)
G163230 NA other upstream 1490221 37878815 ~ 37879415 (-)
LOC111194721 NA other upstream 1592502 37981096 ~ 38024333 (-)
G163591 NA other upstream 3039254 39427848 ~ 39428541 (-)
G163627 LOC108443054,LOC108263931,LOC108265089 other upstream 3102188 39490782 ~ 39493278 (-)
LOC111194826 NA other upstream 3436069 39824663 ~ 39828074 (-)

Expression


Co-expression Network