CI01000012_13522084_13525252 (PBLD2, PBLD)


Basic Information

Item Value
gene id CI01000012_13522084_13525252
gene name PBLD2, PBLD
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 13522084 ~ 13525319 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_13522084_13525252.mRNA
AGTAAAACAGCTGCAACAAATGGAGATTCCAATATTTACTGTTGATGCTTTTACTAATTTACCTTTTAAAGGTAATCCTGCTGCAGTATGTCTTATAGAGAATGTGCAAGGTTTGGGTTACGCTGGTTTACCCCCAAAAGTGAGGTTCCACTATGTGGACATGCAACACTGGCCTCAGCAGCAGTGCTCTTTTACCTTAAAAACTATGAGTGGGGAGCTTCATGTGCGCCAGCATGAAGAATCTCTAATAATGGACTTCCCCTTAAACAAACCAAAGCCCCAGGACCAACATGAAATCAAGAATCTCTTGAAAGCTGTTGTTGGAGACTTACCCATCCAGGATGTGTGCTACTGTCCAACAACAAGGAAATTGATGATTCGTCTATCTGACACATGTGACAGATCTGAACTTACATCTTTGAGGCCTGAAGCAGAAGCTCTGCTGAAAAACGAATCTACTGGGAAGATTAAAGGTGTCATTGTTACAATGAAAGGAGCTCCAAACGCACAGCCTGGATATGACTTCTATTCCCGTTACTTTGCCCCTTGGTTTGGGATCCCTGAAGATCCAGTCACTGCCTACCAGTGCTCCAGTCGTGGAGGTGAACTGGAGCTGGAGCTGAGGGATGATGGTCGACTCAACATCAGCGGTCGGGCGCAGATCATTCTTCAGGGAACTCTTAAAATCTAGACAACTTGCACAATACTCACTGAATCTTTGAATTGTTTAATGGGAATCATGTTCATTTTCTTTCTTA

Function

symbol description
pbld2 Predicted to enable isomerase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be active in cytoplasm. Is expressed in myotome. Orthologous to human PBLD (phenazine biosynthesis like protein domain containing).
pbld Predicted to enable isomerase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be active in cytoplasm. Orthologous to human PBLD (phenazine biosynthesis like protein domain containing).

NR:

description
Phenazine biosynthesis-like domain-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_13522084_13525252.mRNA True 758 mRNA 0.43 7 13522084 13525319

Neighbor

gene id symbol gene type direction distance location
CI01000012_13498541_13510228 RUFY2 coding upstream 11819 13498541 ~ 13510265 (+)
CI01000012_13471010_13484053 TSPAN15 coding upstream 36072 13471010 ~ 13486220 (+)
CI01000012_13445338_13452629 HK2, HKI, HK1, HK1.L coding upstream 69455 13444855 ~ 13452629 (+)
CI01000012_13442338_13442897 NA coding upstream 78865 13440853 ~ 13443219 (+)
CI01000012_13404454_13437477 HKDC1 coding upstream 84362 13404454 ~ 13437722 (+)
CI01000012_13527966_13529695 PBLDP, PBLD coding downstream 1865 13527184 ~ 13529762 (+)
CI01000012_13533459_13538332 PBLD2, PBLD coding downstream 8071 13533390 ~ 13538443 (+)
CI01000012_13551086_13554035 NA coding downstream 25454 13550773 ~ 13554312 (+)
CI01000012_13559514_13590448 PSD coding downstream 34195 13559514 ~ 13590493 (+)
CI01000012_13619458_13633023 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding downstream 93690 13619009 ~ 13633801 (+)
G76600 NA non-coding upstream 766 13520992 ~ 13521318 (+)
G76569 NA non-coding upstream 132931 13388853 ~ 13389153 (+)
G76567 NA non-coding upstream 134706 13387048 ~ 13387378 (+)
G76594 NA non-coding downstream 13202 13538521 ~ 13539179 (+)
G76629 NA non-coding downstream 30674 13555993 ~ 13556230 (+)
G76630 NA non-coding downstream 32106 13557425 ~ 13557687 (+)
G76584 NA non-coding downstream 66180 13591499 ~ 13593268 (+)
CI01000012_13029637_13033226 RGS17 other upstream 483185 13029435 ~ 13038899 (+)
G76374 NA other upstream 772915 12745531 ~ 12749169 (+)
G76385 NA other upstream 846418 12630755 ~ 12675666 (+)
G75533 NA other upstream 2376345 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 3297797 10223697 ~ 10236276 (+)
G76645 NA other downstream 126540 13651859 ~ 13652234 (+)
G76656 NA other downstream 178168 13703487 ~ 13739731 (+)

Expression


Co-expression Network