G187199


Basic Information

Item Value
gene id G187199
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 4214595 ~ 4214945 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU253837
taattcctgatggtagagtctgaccactgcacaaagcagctcttctccatccagcacatcccaaaaattctcaatgaggttaagatctggactctgtggtgaactctctctcaatccatgtgtgaaaatgataaatgatgatctcatgctccctgaaccctgaactctttcacaattccagcaccatgaatcctgacattgtcttatcttggaatatggccgtgataatcagggaagaaaacatctattgatggaataacctggtctatattcagtatattcaggtagtcacctgacctcattctttcagcacatactgttgctgaacctaaacctgcagaccaactgcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253837 True 351 lncRNA 0.42 1 4214595 4214945

Neighbor

gene id symbol gene type direction distance location
LOC103026921 LOC108431627 coding upstream 196638 3923887 ~ 4017957 (+)
LOC111195456 NA coding upstream 290933 3923452 ~ 3923662 (+)
mrto4 mrto4,LOC107701993,LOC107706552,LOC107657981,LOC107712985 coding upstream 323528 3884837 ~ 3891067 (+)
LOC103027213 NA coding upstream 409280 3803706 ~ 3805315 (+)
LOC103033843 LOC108431592 coding upstream 425240 3788229 ~ 3789355 (+)
mrps16 mrps16,LOC107712960 coding downstream 105142 4320087 ~ 4323825 (+)
LOC111195435 NA coding downstream 115654 4330599 ~ 4343289 (+)
LOC103029183 NA coding downstream 132780 4347725 ~ 4355832 (+)
tas1r3 tas1r3 coding downstream 265333 4480278 ~ 4491990 (+)
LOC103028563 NA coding downstream 277599 4492544 ~ 4506561 (+)
G187197 NA non-coding upstream 14537 4199803 ~ 4200058 (+)
G187073 NA non-coding upstream 165481 4020278 ~ 4049114 (+)
G187078 kcnab2,LOC108431628,LOC105017255,LOC108255041,LOC106565914,LOC106582955 non-coding upstream 170709 4036514 ~ 4043886 (+)
G187059 NA non-coding upstream 257136 3886649 ~ 3957459 (+)
G187063 NA non-coding upstream 297812 3900971 ~ 3916783 (+)
LOC111195359 NA non-coding downstream 155483 4370428 ~ 4371290 (+)
G187266 NA non-coding downstream 256693 4471638 ~ 4472383 (+)
G187276 NA non-coding downstream 323316 4538261 ~ 4540200 (+)
G187281 NA non-coding downstream 334986 4549931 ~ 4583330 (+)
G187306 NA non-coding downstream 581983 4796928 ~ 4797556 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other upstream 819752 3392387 ~ 3394843 (+)
G186880 lmcd1 other upstream 1212580 2980497 ~ 3002015 (+)
podxl2 NA other upstream 3119258 606833 ~ 1095337 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other upstream 3676379 510575 ~ 538216 (+)
G186231 NA other upstream 4099508 107396 ~ 115087 (+)
p3h1 NA other downstream 1564946 5779891 ~ 5798979 (+)
LOC103029365 NA other downstream 2862220 7077165 ~ 7098672 (+)
trnaq-uug_4 NA other downstream 2977209 7192154 ~ 7192226 (+)
LOC111195452 NA other downstream 3897058 8112003 ~ 8113242 (+)
agtrap agtrap other downstream 4041851 8256796 ~ 8271712 (+)

Expression


Co-expression Network