G187266


Basic Information

Item Value
gene id G187266
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 4471638 ~ 4472383 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU253923
aaagtttgaacgctaggtgtcagaaacgggccaaagagtctaaaagcggagagagtgcgcatttctagcgcagaaaaacaggccaaagagtctaaaagcggagagagtgcgcatttctagcgcagaaaaacgggccaaagagtctaaaagcggagagggtgcgcatttctagcgcagaaaaacgggccaaagagtctaaaagcggagagggtgcgcatttctagctcagaaaaacaggccaaagagtctaaaagttgccgtaattaaggagtttaatattaagagacatcatgaaattaaacatcaatttgaaaaatcttagtttacacaacactgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253923 True 338 lncRNA 0.43 2 4471638 4472383

Neighbor

gene id symbol gene type direction distance location
LOC103029183 NA coding upstream 115806 4347725 ~ 4355832 (+)
LOC111195435 NA coding upstream 128349 4330599 ~ 4343289 (+)
mrps16 mrps16,LOC107712960 coding upstream 147813 4320087 ~ 4323825 (+)
LOC103026921 LOC108431627 coding upstream 453681 3923887 ~ 4017957 (+)
LOC111195456 NA coding upstream 547976 3923452 ~ 3923662 (+)
tas1r3 tas1r3 coding downstream 7895 4480278 ~ 4491990 (+)
LOC103028563 NA coding downstream 20161 4492544 ~ 4506561 (+)
LOC103028044 NA coding downstream 61429 4533812 ~ 4537935 (+)
fam213b fam213b,LOC107702003,LOC107582414,LOC107712975 coding downstream 87919 4560302 ~ 4574554 (+)
miip NA coding downstream 155559 4627942 ~ 4648432 (+)
LOC111195359 NA non-coding upstream 100348 4370428 ~ 4371290 (+)
G187199 NA non-coding upstream 256693 4214595 ~ 4214945 (+)
G187197 NA non-coding upstream 271580 4199803 ~ 4200058 (+)
G187073 NA non-coding upstream 422524 4020278 ~ 4049114 (+)
G187078 kcnab2,LOC108431628,LOC105017255,LOC108255041,LOC106565914,LOC106582955 non-coding upstream 427752 4036514 ~ 4043886 (+)
G187276 NA non-coding downstream 65878 4538261 ~ 4540200 (+)
G187281 NA non-coding downstream 77548 4549931 ~ 4583330 (+)
G187306 NA non-coding downstream 324545 4796928 ~ 4797556 (+)
G187305 NA non-coding downstream 325233 4797616 ~ 4800508 (+)
G187307 NA non-coding downstream 328723 4801106 ~ 4801906 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other upstream 1076795 3392387 ~ 3394843 (+)
G186880 lmcd1 other upstream 1469623 2980497 ~ 3002015 (+)
podxl2 NA other upstream 3376301 606833 ~ 1095337 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other upstream 3933422 510575 ~ 538216 (+)
G186231 NA other upstream 4356551 107396 ~ 115087 (+)
p3h1 NA other downstream 1307508 5779891 ~ 5798979 (+)
LOC103029365 NA other downstream 2604782 7077165 ~ 7098672 (+)
trnaq-uug_4 NA other downstream 2719771 7192154 ~ 7192226 (+)
LOC111195452 NA other downstream 3639620 8112003 ~ 8113242 (+)
agtrap agtrap other downstream 3784413 8256796 ~ 8271712 (+)

Expression


Co-expression Network