G77149


Basic Information

Item Value
gene id G77149
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12780760 ~ 12781057 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87995
GACATTTTGGACAATTTCATGCTCCCAACTTTGTGGGAACAGTTTGGGGATGGCCCCTTCCTGTTCCAACATGACTGCGCACCAGTGCACAAAACAAGGTCCATAAAGACATGGATGAGCGAGTTTGGTGTGGAGGAACTTGACTGGCCTGCACAGAGTCCTGACCTCAACCCGATAGAACACCTTTGGGATGAATTAGAGCGGAGACTGCGAGCCAGGCCTTCTCGCCAACATCACTGCCTGACCTCACAAATGCGCTTCTAGAAGAATGGTCAAAAATTCCCATAAACACACTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87995 True 298 lncRNA 0.50 1 12780760 12781057

Neighbor

gene id symbol gene type direction distance location
CI01000012_12751670_12759821 ABCB10 coding downstream 20939 12751273 ~ 12759821 (-)
CI01000012_12745876_12748041 ACTA2, ACTC1B, MGC64484, MGC53823, ACTC1, MGC75582, ACT3, ACTA1, ACTC1A, ACTC1.L, ACTA1B, ACT2, ACTA1A coding downstream 31611 12745581 ~ 12749149 (-)
CI01000012_12741444_12744014 NA coding downstream 36326 12741314 ~ 12744434 (-)
CI01000012_12691707_12693855 PDCD2 coding downstream 86905 12691644 ~ 12693855 (-)
CI01000012_12681945_12685282 BRAFLDRAFT_86031 coding downstream 95478 12681826 ~ 12685282 (-)
CI01000012_12783994_12795809 NA coding upstream 2867 12783924 ~ 12796569 (-)
CI01000012_12811846_12819195 NA coding upstream 30677 12811734 ~ 12819361 (-)
CI01000012_12872801_12891084 PGBD5 coding upstream 90805 12871862 ~ 12891084 (-)
CI01000012_12902396_12904687 AGT coding upstream 121104 12902161 ~ 12905621 (-)
CI01000012_12954694_12954954 SF3B5, BRAFLDRAFT_284483 coding upstream 173403 12954446 ~ 12957833 (-)
G77134 NA non-coding downstream 61573 12718946 ~ 12719187 (-)
G77128 NA non-coding downstream 75208 12705339 ~ 12705552 (-)
G76994 NA non-coding downstream 115109 12652366 ~ 12665651 (-)
G77014 NA non-coding downstream 715785 12064562 ~ 12064975 (-)
G76966 NA non-coding downstream 834231 11945062 ~ 11946529 (-)
G76982 NA non-coding upstream 117298 12898355 ~ 12899359 (-)
G76975 NA non-coding upstream 119357 12900414 ~ 12901677 (-)
G77198 NA non-coding upstream 127572 12908629 ~ 12908909 (-)
G77200 NA non-coding upstream 131791 12912848 ~ 12913111 (-)
G77201 NA non-coding upstream 132641 12913698 ~ 12913923 (-)
CI01000012_12079581_12084139 NA other downstream 696500 12078936 ~ 12084260 (-)
CI01000012_12047175_12052116 NA other downstream 728553 12046728 ~ 12052541 (-)
G75608 NA other downstream 2159889 10611915 ~ 10620871 (-)
G74982 NA other downstream 3204788 9575648 ~ 9576149 (-)
CI01000012_09400481_09401810 EIF4EBP2 other downstream 3378792 9398076 ~ 9402378 (-)
G77287 NA other upstream 838219 13619276 ~ 13633819 (-)

Expression


Co-expression Network