G77134


Basic Information

Item Value
gene id G77134
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12718946 ~ 12719187 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87980
TTGTGGGAATTTAAACAGTATTTTTTATTGTTTGCTCAAAATTGAAGAATAACAAACTACAATAAACTTGCACTGTACAAATCCTTCCAAATGAAAGGGAAGAAAAGATCACATTCTCTCAGAATTAGTATCAGTTTATTCACACATGGCCACATTCACACTTGAATTAAACAGATGTGTCTGTACTCCAATGTCGACTAATCTTCCACCTCCAATGACCTAAGAAAAATAGTGATCTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87980 True 242 lncRNA 0.33 1 12718946 12719187

Neighbor

gene id symbol gene type direction distance location
CI01000012_12691707_12693855 PDCD2 coding downstream 25091 12691644 ~ 12693855 (-)
CI01000012_12681945_12685282 BRAFLDRAFT_86031 coding downstream 33664 12681826 ~ 12685282 (-)
CI01000012_12675446_12678283 RAB1A, RAB1AB coding downstream 40663 12675311 ~ 12678283 (-)
CI01000012_12613737_12614861 SERTAD2 coding downstream 102735 12611559 ~ 12616211 (-)
CI01000012_12598963_12604426 LGALSL coding downstream 113574 12597604 ~ 12605372 (-)
CI01000012_12741444_12744014 NA coding upstream 22127 12741314 ~ 12744434 (-)
CI01000012_12745876_12748041 ACTA2, ACTC1B, MGC64484, MGC53823, ACTC1, MGC75582, ACT3, ACTA1, ACTC1A, ACTC1.L, ACTA1B, ACT2, ACTA1A coding upstream 26394 12745581 ~ 12749149 (-)
CI01000012_12751670_12759821 ABCB10 coding upstream 32086 12751273 ~ 12759821 (-)
CI01000012_12783994_12795809 NA coding upstream 64737 12783924 ~ 12796569 (-)
CI01000012_12811846_12819195 NA coding upstream 92547 12811734 ~ 12819361 (-)
G77128 NA non-coding downstream 13394 12705339 ~ 12705552 (-)
G76994 NA non-coding downstream 53295 12652366 ~ 12665651 (-)
G77014 NA non-coding downstream 653971 12064562 ~ 12064975 (-)
G76966 NA non-coding downstream 772417 11945062 ~ 11946529 (-)
G76956 NA non-coding downstream 814211 11904512 ~ 11904735 (-)
G77149 NA non-coding upstream 61573 12780760 ~ 12781057 (-)
G76982 NA non-coding upstream 179168 12898355 ~ 12899359 (-)
G76975 NA non-coding upstream 181227 12900414 ~ 12901677 (-)
G77198 NA non-coding upstream 189442 12908629 ~ 12908909 (-)
G77200 NA non-coding upstream 193661 12912848 ~ 12913111 (-)
CI01000012_12079581_12084139 NA other downstream 634686 12078936 ~ 12084260 (-)
CI01000012_12047175_12052116 NA other downstream 666739 12046728 ~ 12052541 (-)
G75608 NA other downstream 2098075 10611915 ~ 10620871 (-)
G74982 NA other downstream 3142974 9575648 ~ 9576149 (-)
CI01000012_09400481_09401810 EIF4EBP2 other downstream 3316978 9398076 ~ 9402378 (-)
CI01000012_12954694_12954954 SF3B5, BRAFLDRAFT_284483 other upstream 235259 12954446 ~ 12957833 (-)
G77287 NA other upstream 900089 13619276 ~ 13633819 (-)

Expression


Co-expression Network