G76440


Basic Information

Item Value
gene id G76440
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12956940 ~ 12957297 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87209
CTATAAAACATTTGAACTTCTCAATGCTGCGACTGACCAGTCAGAATCAAATGTTCCAAATCATAATAAATGGTTATAATTGTTTTTTGAAGGAAATATGCTGATTTTGTTTGTATAATGATGATAAAGAAACTGCGGATTTACTGCACTGATTTTGACTACATTAAAAAACAAAGACTTTGTTATGTTCAGTGAGGGTGTGATGGTCACATCACACAGATGGTTTGTTGGCAAGGAAATTTTTTCATAAAGCAGATCTCATTTCATATTTTAATGTTAAAAAAAATGTATGTGTGAGTCATCAAAAATGGAATCATCCACTTGATTGGGTTCTGTTTGGTCTCATTAATGTAATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87209 True 358 lncRNA 0.31 1 12956940 12957297

Neighbor

gene id symbol gene type direction distance location
CI01000012_12930929_12947409 PHACTR2 coding upstream 9531 12930929 ~ 12947409 (+)
CI01000012_12892163_12901139 COG2 coding upstream 55225 12892163 ~ 12901715 (+)
CI01000012_12832011_12865894 GALT2, GALNT2 coding upstream 91046 12832011 ~ 12865894 (+)
CI01000012_12761469_12776431 URB2 coding upstream 180470 12761469 ~ 12776470 (+)
CI01000012_12733327_12736780 RAB4A coding upstream 219671 12733327 ~ 12737269 (+)
CI01000012_13029637_13033226 RGS17 coding downstream 72138 13029435 ~ 13038899 (+)
CI01000012_13063943_13081607 NA coding downstream 105546 13062843 ~ 13082567 (+)
CI01000012_13102619_13168566 PRIM2 coding downstream 145322 13102619 ~ 13168566 (+)
CI01000012_13291350_13311094 NA coding downstream 334053 13291350 ~ 13312156 (+)
CI01000012_13391082_13401374 KIF1BP coding downstream 433785 13391082 ~ 13401692 (+)
G76438 NA non-coding upstream 864 12955753 ~ 12956076 (+)
G76437 NA non-coding upstream 1306 12954448 ~ 12955634 (+)
G76436 NA non-coding upstream 3175 12953566 ~ 12953765 (+)
G76434 NA non-coding upstream 47433 12908999 ~ 12909507 (+)
G76372 NA non-coding upstream 53651 12902086 ~ 12903289 (+)
G76441 NA non-coding downstream 3619 12960916 ~ 12962457 (+)
G76443 NA non-coding downstream 6598 12963895 ~ 12964247 (+)
G76444 NA non-coding downstream 7662 12964959 ~ 12965257 (+)
G76445 NA non-coding downstream 10816 12968113 ~ 12968381 (+)
G76446 NA non-coding downstream 11677 12968974 ~ 12969187 (+)
G76374 NA other upstream 207771 12745531 ~ 12749169 (+)
G76385 NA other upstream 281274 12630755 ~ 12675666 (+)
G75533 NA other upstream 1811201 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 2732653 10223697 ~ 10236276 (+)
G73578 NA other upstream 4589313 8366806 ~ 8367627 (+)
G76645 NA other downstream 694562 13651859 ~ 13652234 (+)
G76656 NA other downstream 746190 13703487 ~ 13739731 (+)

Expression


Co-expression Network