CI01000013_03875165_03877327


Basic Information

Item Value
gene id CI01000013_03875165_03877327
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3875108 ~ 3877458 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_03875165_03877327.mRNA
AGTAATACAGTATATCGATCAGCCTTGAAAACATTGCCATGTCTTTTGTTTTTGTCCTAATCAAACTAACTGCCTTTGTGTTTTTCTTTAATTGCAGAGCACCTTTATGAGGCATTGCATGGGTTTGTGCAATGGACTGCAATAGAAACTTTAACAATTTTCAGCACACTTCCCTGCTGCTCCTTTCCTTCCTGGAGCAAAAAGGCTGCCAAAATAGTGAGCTTCCTGAACAGCTAAAGCTGCCTACCAATCACAATTATATTGAAATTGACGAAGAATTACAAACCGACGGTCACAGTTGCTCAGTCACCTACAGAGAAATTCTGCATGATCTTCAGAATCAAGTTCAGCCTCAACTGCCAGTTGATGAGGAAGAGGCTCAGGCAGCAAGGGAATTGGCTGCAGAATTGATCAGAATTGCAGACCTGCTTGAGCAGAGAGTCCTGTTTCAAGCTGCGGAAACTTTGACCAAGAAACTGGACACATGCCCCACACAATTTTGGGCTGGACATCTATCTGATGGAGTGCAGGGCTTGCTTCGCCAGGTGGCAGGAGCCAAAGAGTTTAAGAAGGAACTTGTTGAGATGGCCTTCACTTTTGTGCTCATGAAGACTGTGTGTGAGCATGTGCCCCAGTTTCTGTTCAGTCTTTATGGCTCAGTGGTCCAGTATTTTGGATCCCGCTGATCCGTGTACAAGTTATACAATTATAAGGTTTAGAATGTGAATGTTTGTATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_03875165_03877327.mRNA True 743 mRNA 0.43 3 3875108 3877458

Neighbor

gene id symbol gene type direction distance location
CI01000013_03793962_03821347 CFTR coding downstream 53761 3793645 ~ 3821347 (-)
CI01000013_03726253_03740014 NA coding downstream 134700 3726117 ~ 3740408 (-)
CI01000013_03710900_03714487 NA coding downstream 160621 3708952 ~ 3714487 (-)
CI01000013_03588879_03592043 NA coding downstream 283065 3588767 ~ 3592043 (-)
CI01000013_03585420_03587386 ARPIN coding downstream 287722 3585252 ~ 3587386 (-)
CI01000013_03879587_03884308 WEE2 coding upstream 1875 3879333 ~ 3884308 (-)
CI01000013_03897674_03902314 AGK coding upstream 19136 3896594 ~ 3902314 (-)
CI01000013_03911586_03916513 NA coding upstream 33151 3910609 ~ 3916634 (-)
CI01000013_03918402_03926395 RAPSN coding upstream 40714 3918172 ~ 3926395 (-)
CI01000013_03929711_03933888 KBTBD4 coding upstream 51375 3928833 ~ 3934118 (-)
G80382 NA non-coding downstream 34974 3837914 ~ 3840134 (-)
G80377 NA non-coding downstream 39252 3823318 ~ 3835856 (-)
G80365 NA non-coding downstream 89237 3785295 ~ 3785871 (-)
G80364 NA non-coding downstream 92426 3782252 ~ 3782682 (-)
G80326 NA non-coding downstream 143311 3731598 ~ 3731797 (-)
G80402 NA non-coding upstream 69393 3946851 ~ 3948820 (-)
G80404 NA non-coding upstream 82385 3959843 ~ 3961577 (-)
G80407 NA non-coding upstream 84680 3962138 ~ 3962379 (-)
G80408 NA non-coding upstream 85064 3962522 ~ 3962848 (-)
G80409 NA non-coding upstream 85519 3962977 ~ 3963204 (-)
G80271 NA other downstream 151501 3719433 ~ 3723607 (-)
G80262 NA other downstream 307571 3565171 ~ 3567537 (-)
G79690 NA other downstream 1059716 2813247 ~ 2815392 (-)
G78296 NA other downstream 3848211 26528 ~ 26897 (-)
G80399 NA other upstream 26609 3904067 ~ 3906240 (-)
G80443 NA other upstream 187484 4064942 ~ 4066017 (-)
CI01000013_04561253_04567647 MAP2K1 other upstream 679410 4560340 ~ 4567647 (-)
G81032 NA other upstream 871351 4748809 ~ 4750561 (-)
G81547 NA other upstream 1862068 5739526 ~ 5744038 (-)

Expression


Co-expression Network