CI01000013_04311625_04312179 (CUNH15ORF61, C4H15ORF61)


Basic Information

Item Value
gene id CI01000013_04311625_04312179
gene name CUNH15ORF61, C4H15ORF61
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4311420 ~ 4312417 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_04311625_04312179.mRNA
ACTGACAACCGAACCGGGAATAGGATTCAAGATCACAGAAAGTTTCGGCGATATGTTTGCACTGACTAAAGGTCAGCTGCTGTTTTTTGGGGTTTTATGCTCTTTATTTCTCGTGACAGCTTTGTTAACAAACTGTCACGTTGCTTAATTTCTTTTTCATTACGAAATAATGACGTGACGTGCCAACGGTAGCTCTTTAAACGCCTTTTTAATATTAGACTTTAGGGTTTACTCAGAAATGACAGAAGTTCTGCGGAGAATACACAGCGGCATCCTAAAAGTGGCGTTGTTCCCTAGCACGTTTGGGAATAAAGCGCTTCGTCCTGCCGCCTCTGAAGTATTAACATGTCACCTCACACAGCGCGCGCTCCCGCCCTGGACTTCGTTCTGCGTGCGCTACCGTGACGTCATCAATGACCAGTTCGGTCTGTCCAACTTCAACTGGCAGGTGCAGGGAGCGAACTACCACATCCTTAGGACTGGTGCTTTCCCTTTCATCAAATACCACTGCACCAAAGCCCCTCCACAGAACCTGGAGTTTGAAAATATGTTTTTTGGTGCATTGAAAGTCATCAATCTTGGTATCCCATGCTTGGCATATGGCTTGGGCTCATGGATGGTAGTTGGTGTGACAGAGAAAGTTCAGACATCTGCAGGACCTGTTACCGTTTACTTTGCGTACAAGGAGGTGGAGGGCGCTCAGTTCTAACATCAGAGACACAAGGAGTATTTGAAGGACTCGAGTTTCACAGGCCAATATTTGTCATACAGAATCTCTAAAAAATGTATGCAAATGGCCTGGAATGAACAAATGCACTTTTGCACATATATGATAATAAAATAAAATTATTAATTTTCAATTTTGGGTTTTTCTTTTCAATATAACACAATTTTGATAACTACAAATTAATAAA

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_04311625_04312179.mRNA True 914 mRNA 0.42 2 4311420 4312417

Neighbor

gene id symbol gene type direction distance location
CI01000013_04241966_04247231 SKOR1B coding downstream 63876 4241911 ~ 4247544 (-)
CI01000013_04219612_04232778 PIAS1, PIAS1B coding downstream 78269 4219586 ~ 4233151 (-)
CI01000013_04215370_04216413 RXFP3.3A3 coding downstream 94828 4214961 ~ 4216592 (-)
CI01000013_04206025_04212137 MORF4L1B, MORF4L1 coding downstream 99283 4205721 ~ 4212137 (-)
CI01000013_04186280_04202524 NA coding downstream 108896 4185536 ~ 4202524 (-)
CI01000013_04322711_04343979 IQCH coding upstream 10154 4322571 ~ 4343979 (-)
CI01000013_04350678_04363643 SMAD3B, SMAD3 coding upstream 37413 4349830 ~ 4363689 (-)
CI01000013_04368048_04369323 SMAD3 coding upstream 54515 4366932 ~ 4369362 (-)
CI01000013_04412468_04417725 SMAD6 coding upstream 99783 4412200 ~ 4418864 (-)
CI01000013_04438907_04455220 NA coding upstream 126218 4438635 ~ 4455523 (-)
G80677 NA non-coding downstream 71444 4239666 ~ 4239976 (-)
G80674 NA non-coding downstream 97141 4213950 ~ 4214279 (-)
G80671 NA non-coding downstream 124144 4186666 ~ 4187276 (-)
G80669 NA non-coding downstream 129171 4181792 ~ 4182249 (-)
G80652 NA non-coding downstream 152690 4158390 ~ 4158730 (-)
G80743 NA non-coding upstream 65634 4378051 ~ 4378268 (-)
G80748 NA non-coding upstream 85877 4398294 ~ 4398519 (-)
G80761 NA non-coding upstream 97390 4409807 ~ 4410063 (-)
G80740 NA non-coding upstream 100903 4413320 ~ 4414146 (-)
G80443 NA other downstream 245403 4064942 ~ 4066017 (-)
G80399 NA other downstream 405180 3904067 ~ 3906240 (-)
G80271 NA other downstream 587813 3719433 ~ 3723607 (-)
G80262 NA other downstream 743883 3565171 ~ 3567537 (-)
G79690 NA other downstream 1496028 2813247 ~ 2815392 (-)
CI01000013_04561253_04567647 MAP2K1 other upstream 244451 4560340 ~ 4567647 (-)
G81032 NA other upstream 436392 4748809 ~ 4750561 (-)
G81547 NA other upstream 1427109 5739526 ~ 5744038 (-)
CI01000013_05883498_05884071 CHTF8 other upstream 1569632 5882049 ~ 5884071 (-)
CI01000013_07339918_07367774 NA other upstream 3027292 7339709 ~ 7367774 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012763 C18H15orf61 coding NC_007129.7 CM002902.2 19883325 ~ 19886744 (+)
rainbow trout (Oncorhynchus mykiss) LOC110500125 LOC106561674 misc NC_048566.1 CM023220.2 94348518 ~ 94359922 (-)