CI01000013_06209318_06233289


Basic Information

Item Value
gene id CI01000013_06209318_06233289
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 6209096 ~ 6233383 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_06209318_06233289.mRNA
TTATAAAAATGTAATCCCTCAATGTATTTGTCAATATAGATGCATAATCCACTGGAATCTTTGCATTGCATTCTAGTCCATGCATGCAAATGGACAAGTTCCTGTCACTGGTGTAGTAATATATGTACATAATGATGGCCGGTCCACTTTCATCTCAGCACATGAAGCCCAACAGTGGAGTCACAGCTGCTCAGCTTATTAGCTCATTGAATTAGACCAATCATGAGCCAAATGGAGGAAAGACCGGACACAGTACCACGCAACGCTTATAAATCAGTCTTCCACTCTAATGGCTGTTTCAGCTCTTCTTATTACACAGCTGATCCTATGCCACAGCAAAAAGTTTTCACGTATATTTTGGCTAGAAAGGGAGGAAATTGGCGATGGTCTCCAAGGCAGGAAGCTCATTTAGTTCCAATGGAGGAATGCATTCCCTACAAAAAGAGGCCAGCTTTCTTTAAGACCTTGGTGAAAGGAAAAGGCTGTTATCTGTCAGTAACACAAAACACGTACCTCCCTTGCAGAATCTCAGCCACGCGAAATAATCAGCCAAACAGGAGAGCTACTCCCGCTGGAAATCACGGTAATAAGCCCACCATCCCCTTTCGAAATAACAGCTGGTTATGTTTTTCTAATGGAGAAGCACCATCACAAGCCGTCGCTTCTCGTTCATCAGCAGCTGTTAGCTGTGACTGGAGAATTTATGCTCCTGTCTCGTCACCCTCACACCTGGATGCTGAGACGGGGGCAAGGGGTCCAGGTCGGCTTAATAGTGACAACTCTCATGCTGATGATTCTAGGGTGATACATGTGATACGCACCATCTGCCGAAGGAACCTCAACTATCATGCTGAAGTATTAGGCTGTTTGGATTATTGGGATAGGATATTTGTCCTCAACACAAGCTGGGATAAGGAGCTAAATGATAAACCTAACGATATCAGTGTTGTACAGGAGTAAGCATATTCAGAGGAATAGGTTTTTACCACTATTGGGGGTTGAAATGAATTTTCATTCAACGTTCTTCTTATGCTTCCCAGGCAAAGAACTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_06209318_06233289.mRNA True 1054 mRNA 0.43 4 6209096 6233383

Neighbor

gene id symbol gene type direction distance location
CI01000013_06132773_06163282 NA coding upstream 45459 6132565 ~ 6163637 (+)
CI01000013_06076169_06080164 NA coding upstream 128735 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA coding upstream 148827 6049864 ~ 6060269 (+)
CI01000013_06038814_06043689 NA coding upstream 163860 6038814 ~ 6045236 (+)
CI01000013_06025196_06025887 NA coding upstream 182256 6024703 ~ 6026840 (+)
CI01000013_06278898_06283356 MGAT4C coding downstream 45515 6278898 ~ 6285154 (+)
CI01000013_06311729_06313001 RASSF9 coding downstream 78346 6311729 ~ 6314124 (+)
CI01000013_06405275_06423872 SLC6A15 coding downstream 170813 6404196 ~ 6424521 (+)
CI01000013_06440333_06446814 SSPN coding downstream 206243 6439626 ~ 6447195 (+)
CI01000013_06548714_06565582 PLEKHG7 coding downstream 314586 6547969 ~ 6566123 (+)
G81672 NA non-coding upstream 124201 6083474 ~ 6084895 (+)
G81738 NA non-coding downstream 97657 6331040 ~ 6331644 (+)
G81754 NA non-coding downstream 118522 6351905 ~ 6352119 (+)
G81762 NA non-coding downstream 148439 6381822 ~ 6426042 (+)
G81780 NA non-coding downstream 154456 6387839 ~ 6388687 (+)
G81765 NA non-coding downstream 215180 6448563 ~ 6449178 (+)
G80845 NA other upstream 1372864 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 2143267 4050837 ~ 4065829 (+)
G80062 NA other upstream 2624312 3584008 ~ 3584784 (+)
G81994 NA other downstream 1102562 7335945 ~ 7338239 (+)
G82168 NA other downstream 1794955 8028338 ~ 8041343 (+)
G82581 NA other downstream 3095946 9329329 ~ 9334948 (+)
G84005 NA other downstream 3368228 9601611 ~ 9602235 (+)
G84194 NA other downstream 3797225 10030608 ~ 10036953 (+)

Expression


Co-expression Network