CI01000013_06132773_06163282


Basic Information

Item Value
gene id CI01000013_06132773_06163282
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 6132565 ~ 6163637 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_06132773_06163282.mRNA
GCATATAAAGAGATGCTTTCAGCTATCAGTAAGGCATAGTCTCAAAGAGACAGAAAGAGAGATGCTTTTAATGCATTTACTTTTGTAGGCCACTACAAAAGATGCCTCAATGGTTGACAACAAAGTAGAGAGATTAATGTAGACGATTTAGTGACCCACCAGAGCGGCGTGTCAGTCTGGTGGAATCCGCCTGACCTTTTGCATTATCATGGGGATTCAGATAATGATTCTCAGCGGGGAGTCTGAAGTGTGCATTATGTGTGCCTCTCACTTTGTTAAAGAATATAATCAGTCCTTAGCACTAGGACACAAGATGAAAAACAGATGGATGAGGGAGCGAACTGTGAAGGGCAGAGAATCTGACAGCTTCTCTGCACCTGTGGCCTTATGGGATAGCAAACTGTCCAGTGGTTGCACACTTCAGAATCTCAAAAGATGTTGTATGTCTCGTCAACCAGCTGCCTCGGGTCGCACCACGATCGAGCATCTCGGCGGCTGCGCTCACATCCTCAGTCGGCATGAGAGGAAGGACACGGCGGCTGCAGAGAACCGACTGCGCCGCGATAATTACAACCCGCACCAGATTTCTACCAATATTTGTAACATTTTGAAGGATGACATTATTAGCAAATGATTTTTAGATGTGTAACTGTTATGATGTTCAGTATGTGGCATACTAGAAGTGTGTGGCTGGAACTTATAGGTTATTAATGCCACTGTAACATCCAAAGCCTTTTGAGGAAAAATAGACCATGTATATTTCAGATGCACTTCTGTGTTAAACTCAGGGCCTGTGCTGTGTTTTTTGGATTTAAACCTTTAATCATAGCGAATCAGCACATTAAGCTTTACCATTATGCTCTTATATATGACAGATTTTCTTTTGCTAAGAGGAAAAGTTGTTTTACGAAAGTCTAGAAAACAAATATGATTACCTTATTGCAAAGTTCAACACTAATTGTACCGGTGGGAGTCCTGAGGGAGTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_06132773_06163282.mRNA True 989 mRNA 0.42 4 6132565 6163637

Neighbor

gene id symbol gene type direction distance location
CI01000013_06076169_06080164 NA coding upstream 52204 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA coding upstream 72296 6049864 ~ 6060269 (+)
CI01000013_06038814_06043689 NA coding upstream 87329 6038814 ~ 6045236 (+)
CI01000013_06025196_06025887 NA coding upstream 105725 6024703 ~ 6026840 (+)
CI01000013_05953069_05974101 SWAP70B, SWAP70 coding upstream 157714 5953069 ~ 5974851 (+)
CI01000013_06209318_06233289 NA coding downstream 45459 6209096 ~ 6233383 (+)
CI01000013_06278898_06283356 MGAT4C coding downstream 115261 6278898 ~ 6285154 (+)
CI01000013_06311729_06313001 RASSF9 coding downstream 148092 6311729 ~ 6314124 (+)
CI01000013_06405275_06423872 SLC6A15 coding downstream 240559 6404196 ~ 6424521 (+)
CI01000013_06440333_06446814 SSPN coding downstream 275989 6439626 ~ 6447195 (+)
G81672 NA non-coding upstream 47670 6083474 ~ 6084895 (+)
G81679 NA non-coding upstream 99923 6030192 ~ 6032642 (+)
G81738 NA non-coding downstream 167403 6331040 ~ 6331644 (+)
G81754 NA non-coding downstream 188268 6351905 ~ 6352119 (+)
G81762 NA non-coding downstream 218185 6381822 ~ 6426042 (+)
G81780 NA non-coding downstream 224202 6387839 ~ 6388687 (+)
G81765 NA non-coding downstream 284926 6448563 ~ 6449178 (+)
G80845 NA other upstream 1296333 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 2066736 4050837 ~ 4065829 (+)
G80062 NA other upstream 2547781 3584008 ~ 3584784 (+)
G81994 NA other downstream 1172308 7335945 ~ 7338239 (+)
G82168 NA other downstream 1864701 8028338 ~ 8041343 (+)
G82581 NA other downstream 3165692 9329329 ~ 9334948 (+)
G84005 NA other downstream 3437974 9601611 ~ 9602235 (+)
G84194 NA other downstream 3866971 10030608 ~ 10036953 (+)

Expression


Co-expression Network