G84466


Basic Information

Item Value
gene id G84466
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11015394 ~ 11015705 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96121
CTGTGTCTTAAGAACTAGTCTGACCAACTAGCAATTAGTTAGGGCTAATTAGTCTTACTTTTCAGATTCAAATTTGACCAGTCTGCCTTTTTATGTAACTGACTTTAAAGAAAAAGAGGTTATGATCAGTCTTGAAGAAAAAATTAGATGACTAACTTGTAAGACTAGTCTAAGCAGTTTGTACAACCGGCCACAGAACCTGGGACGGGGGCAGGATACATTCTTGCTAGGGATGCACAATATATCAGTATCGTATTGATTATTTTTCTTTCATTTCAATAGATAGTATTAATAATTATATATGGGATGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96121 True 312 lncRNA 0.35 1 11015394 11015705

Neighbor

gene id symbol gene type direction distance location
CI01000013_10865753_10884937 MAPK8IP2 coding upstream 129093 10865753 ~ 10886301 (+)
CI01000013_10821530_10827412 SEPHS1, SEPHS1.L coding upstream 187417 10821530 ~ 10827977 (+)
CI01000013_10808688_10819703 NA coding upstream 195469 10808688 ~ 10819925 (+)
CI01000013_10756927_10790192 FRMD4A coding upstream 224905 10756927 ~ 10792761 (+)
CI01000013_10586449_10594082 NA coding upstream 420952 10585818 ~ 10594442 (+)
CI01000013_11063977_11172626 NA coding downstream 48272 11063977 ~ 11172634 (+)
CI01000013_11224779_11252341 SHANK3A, SHANK3 coding downstream 208993 11224698 ~ 11253004 (+)
CI01000013_11271292_11274155 NA coding downstream 254901 11270606 ~ 11274754 (+)
CI01000013_11287928_11292308 NA coding downstream 272223 11287928 ~ 11293107 (+)
CI01000013_11326503_11335221 NA coding downstream 310798 11326503 ~ 11335514 (+)
G84464 NA non-coding upstream 3853 11011335 ~ 11011541 (+)
G84445 NA non-coding upstream 103954 10911173 ~ 10911440 (+)
G84444 NA non-coding upstream 109966 10905185 ~ 10905428 (+)
G84383 NA non-coding upstream 165290 10841716 ~ 10850104 (+)
G84410 NA non-coding upstream 207431 10807309 ~ 10807963 (+)
G84470 NA non-coding downstream 8910 11024615 ~ 11024816 (+)
G84473 NA non-coding downstream 30670 11046375 ~ 11046640 (+)
G84437 NA non-coding downstream 111873 11127578 ~ 11128950 (+)
G84486 NA non-coding downstream 122188 11137893 ~ 11138221 (+)
G84425 NA non-coding downstream 237907 11253612 ~ 11256464 (+)
G84250 NA other upstream 799432 10215127 ~ 10215962 (+)
G84215 NA other upstream 936058 10076454 ~ 10079336 (+)
G84194 NA other upstream 978601 10030608 ~ 10036953 (+)
G84005 NA other upstream 1413159 9601611 ~ 9602235 (+)
G84768 NA other downstream 1154284 12169989 ~ 12170818 (+)
G84790 NA other downstream 1169237 12184942 ~ 12201975 (+)
G84864 NA other downstream 1349344 12365049 ~ 12375905 (+)

Expression


Co-expression Network