G84437


Basic Information

Item Value
gene id G84437
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11127578 ~ 11128950 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96092
AATAACACTGATTAAGTGAACATTTTGTCCTCAAAGTTGATGCAGGAAAAATGGGCAAGCGTAAGGTTTTGAGCGAGTTCGACAGGGGCCAAATTGTGATGGCAAATTGTGGGGTGTTCCCGGTCTGCAGTGGTCAGTATATCAAAAGTGGTCAAAGGAAGGAACGGTGTTGAACCGGCGACAGGGTCATGGGCGGTCAAGGCTCATTGATGCACTTGGGGAGCGAAGGCTGGCCCGTGTGGTCCGATCCAACAGAGTTACTGTAGCTCAAATTGCTCAAGAAGTTAATGCTGGTTCTGATAGAAAGGTGTCAGAACAGTGCACCACAGTTTGTTGCATATGGGGCTGCATAGCTGCAGACCAGTCAGGGTGCCCATGCTGACCCCTGTCTACCGCCGAAAGTGCCAACAGTGGGCATGTGAGCATCAGCCTAATTTAAGTGCAAGATTGAGCTAAATATGTAAAAAAAAAAAAAAAAAACTTTGTAATTTTGGGTTAAGGCTAGTATATAATATAAACAGTAGAACCTATAATTGTGTAGTTACAATGTAGCAAGACAAATGCACGTGGTTATGAGTTTGTGTGAGTTTCTTGCAGTACTTTAAGGGCAATTCTCAAAAAATGTCCTCAGGAGTTTGCTAAATCTGTCAGAAAATAGGTAAACGTGTGCGAGTGTGTGTGAGTATGCTCCTTTATGAGTGCTCAGCGGTGATAGCGAGTTTTAAAGACTCTCTCTGGATGTTTAGCTCAGGCTCAGAGGAGATGTTAGAGTGGATCGATTCCCAGAAAGAGACTCTGAGAGAGGACATATCAGCCTGAGGAGAGAGGCATTACTGGATAGATGAGGGGAAAATCTACGAGGGCGATGATAGAAGAGACAGAGAGACAGTGTGAAATAGTGCCAAAACGATGAGGAGAGCAGGAGGAGGTGAAAGAGGAAGAGACGACCACCTGATGTGGAAAAGAAGGGTGAATTCACAGCTACAGATAATAAGATGGCTGTGTGTGGGAAGTCAGGTTTTGCTCTCTTTGTGGGAACCAAATGTCTTCACGAAGACAATAAAAGCTTACAATGAAGACAATGAAGAACTTACAGAACCTACATCATGGTCTCCTGATCAATTGTCGCAATAATCATGTTAAAAAAAAAAAAATAAATAAAATAAAAAGTGGCAGAAGTTTAGGGTTAAAGTATGATTATAATAATGATGACTACATTCTCAAAAAATATTTAGGCCTAAATTAAAAATGTATGCATTTGAATGTCATAAAATATCCATGCTTTTGGATTACAAACTAATAAATTTAAAGGGATAGTTCACCCAAAAATGAAAATTCTGTCATCATTTACTCCCCCTCAAGTTATTCCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96092 True 1373 lncRNA 0.41 1 11127578 11128950

Neighbor

gene id symbol gene type direction distance location
CI01000013_10916049_11031034 NA coding upstream 96419 10913695 ~ 11031159 (+)
CI01000013_10865753_10884937 MAPK8IP2 coding upstream 241277 10865753 ~ 10886301 (+)
CI01000013_10821530_10827412 SEPHS1, SEPHS1.L coding upstream 299601 10821530 ~ 10827977 (+)
CI01000013_10808688_10819703 NA coding upstream 307653 10808688 ~ 10819925 (+)
CI01000013_10756927_10790192 FRMD4A coding upstream 337089 10756927 ~ 10792761 (+)
CI01000013_11224779_11252341 SHANK3A, SHANK3 coding downstream 95748 11224698 ~ 11253004 (+)
CI01000013_11271292_11274155 NA coding downstream 141656 11270606 ~ 11274754 (+)
CI01000013_11287928_11292308 NA coding downstream 158978 11287928 ~ 11293107 (+)
CI01000013_11326503_11335221 NA coding downstream 197553 11326503 ~ 11335514 (+)
CI01000013_11365641_11366348 NA coding downstream 236235 11365185 ~ 11366708 (+)
G84473 NA non-coding upstream 80938 11046375 ~ 11046640 (+)
G84470 NA non-coding upstream 102762 11024615 ~ 11024816 (+)
G84466 NA non-coding upstream 111873 11015394 ~ 11015705 (+)
G84464 NA non-coding upstream 116037 11011335 ~ 11011541 (+)
G84445 NA non-coding upstream 216138 10911173 ~ 10911440 (+)
G84486 NA non-coding downstream 8943 11137893 ~ 11138221 (+)
G84425 NA non-coding downstream 124662 11253612 ~ 11256464 (+)
G84492 NA non-coding downstream 155353 11284303 ~ 11284657 (+)
G84493 NA non-coding downstream 157601 11286551 ~ 11286854 (+)
G84417 NA non-coding downstream 161333 11290283 ~ 11303625 (+)
G84250 NA other upstream 911616 10215127 ~ 10215962 (+)
G84215 NA other upstream 1048242 10076454 ~ 10079336 (+)
G84194 NA other upstream 1090785 10030608 ~ 10036953 (+)
G84005 NA other upstream 1525343 9601611 ~ 9602235 (+)
G84768 NA other downstream 1041039 12169989 ~ 12170818 (+)
G84790 NA other downstream 1055992 12184942 ~ 12201975 (+)
G84864 NA other downstream 1236099 12365049 ~ 12375905 (+)

Expression


Co-expression Network