G84486


Basic Information

Item Value
gene id G84486
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11137893 ~ 11138221 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96141
CTTCGTTAATCTTTGGAACACAAATTAAGATATTTTTGATGAACTTGAGCAATTTAATTACCAATTTCAAGGCCCAGTAAAGTAGAAAAGACATTGTTATAATAGTCCACATGACTACGGTGGTTCAACCTTAATTTTATAAAGCAACGAGAATACTTTTTGTGCGCAAAAACAAAACAAAAATAGCGTCCAGGTTCTACGTCAGAATGCCGGTTTAGTATTGACCAGCTTCTGCATCAGCATCACACGCACGAATAAAGCACTTCATAACATTAAAGGGTACATAACACACACAGTTTCTGCCAATCTTATGTTAATCTTGAGTACCT

Function

NR:

description
PREDICTED: BRCA2-interacting transcriptional repressor EMSY-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96141 True 329 lncRNA 0.36 1 11137893 11138221

Neighbor

gene id symbol gene type direction distance location
CI01000013_10916049_11031034 NA coding upstream 106734 10913695 ~ 11031159 (+)
CI01000013_10865753_10884937 MAPK8IP2 coding upstream 251592 10865753 ~ 10886301 (+)
CI01000013_10821530_10827412 SEPHS1, SEPHS1.L coding upstream 309916 10821530 ~ 10827977 (+)
CI01000013_10808688_10819703 NA coding upstream 317968 10808688 ~ 10819925 (+)
CI01000013_10756927_10790192 FRMD4A coding upstream 347404 10756927 ~ 10792761 (+)
CI01000013_11224779_11252341 SHANK3A, SHANK3 coding downstream 86477 11224698 ~ 11253004 (+)
CI01000013_11271292_11274155 NA coding downstream 132385 11270606 ~ 11274754 (+)
CI01000013_11287928_11292308 NA coding downstream 149707 11287928 ~ 11293107 (+)
CI01000013_11326503_11335221 NA coding downstream 188282 11326503 ~ 11335514 (+)
CI01000013_11365641_11366348 NA coding downstream 226964 11365185 ~ 11366708 (+)
G84437 NA non-coding upstream 8943 11127578 ~ 11128950 (+)
G84473 NA non-coding upstream 91253 11046375 ~ 11046640 (+)
G84470 NA non-coding upstream 113077 11024615 ~ 11024816 (+)
G84466 NA non-coding upstream 122188 11015394 ~ 11015705 (+)
G84464 NA non-coding upstream 126352 11011335 ~ 11011541 (+)
G84425 NA non-coding downstream 115391 11253612 ~ 11256464 (+)
G84492 NA non-coding downstream 146082 11284303 ~ 11284657 (+)
G84493 NA non-coding downstream 148330 11286551 ~ 11286854 (+)
G84417 NA non-coding downstream 152062 11290283 ~ 11303625 (+)
G84250 NA other upstream 921931 10215127 ~ 10215962 (+)
G84215 NA other upstream 1058557 10076454 ~ 10079336 (+)
G84194 NA other upstream 1101100 10030608 ~ 10036953 (+)
G84005 NA other upstream 1535658 9601611 ~ 9602235 (+)
G84768 NA other downstream 1031768 12169989 ~ 12170818 (+)
G84790 NA other downstream 1046721 12184942 ~ 12201975 (+)
G84864 NA other downstream 1226828 12365049 ~ 12375905 (+)

Expression


Co-expression Network