G84864


Basic Information

Item Value
gene id G84864
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 12365049 ~ 12375905 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96598
CATATTGCTTATCACATAACACCAACATTAATTTTTAAACATTTTTTTCTTCCAACAACATTTTATCCCAAAAATGTCAGATCATTCTCAATATTCAAGTGAAAGTTCATGTTTTTTTCCCCAATAATTATACATCCTGGTAAGCGTGTTATGTTCAGTGAAGCATGTTGAGTGAAAGTGAAGAAGGAAATAAGTGGGGAAAAAATACAATATGCTCAAAGAATTAGGACAATACCAGCCACACCAAAGGCCACTGTTGTGCAATTATACCTTAAAAACTGTTCATTTACTGCTCTTGTGTGAGATATGCAATCAAAACAGAAAGACTTTAACTGGTATTTTTAACCTGGTTGGATGTAGGTTCTTTGTCTGCCTACTCAAACTGGCCACTAAAGGATCTCAGAAAGTGGACAGTAGTTGCATGCGGTCAACTGATCTTGTTCTTTTGGCATTATATACCAACATCCCCACCACCACCGCAATGGAGACAACAAAGAGTCCTGCAAAGACCCCGGTGCTTGTGCTCATGTGTAGAAATCCACCGTCATTTGAGGCTGCAGAATTATGAGTCTGTCTCGCCACACGTAGGGGACCCTGGGTGACGTAGTGTCTGGCTGTTTCTTGGCTCATGTCTCGCCTACGTCTGCGTGCGGCTTGACCAAGACAGCCTTGGGCACATCTGGAGTTTGGGCTGTCTTTTGCACACAGGATCACGGAGCAACTAATGTACACCTCATCAAAGCCTCCTGTGAACTTGAAAGCTTGGATCTCAAAGTCATATTTTGTGGAGTCACCTGGGTAAACCATGACTGTTTCATCCATAACACACCCATCTTTGATGATGTCATAAAAGACAGGACTGAACGGATTGTCTTCTGGAGTGGCCCTGCAGGACTCAACGAAGAGTGTGACCTCTGGGAGAGCCGTACGGGCTTCAATACCCATGTAGATGGAGTCCATCAGCTGAACCTGCACTGGATACTGGCTGGGATCTACCTGACTGTTAAAGCTGCTGTCGGTGAAAACTTCAAATGAGTAACTAAATGTACCGAAGCTGGATTCAGTGAAGATGTAGTCAGATTTATGGTTGACGTAGCGGTTTGACACACTGGCTATTTTGGGATACTGGCAGGAGAAGCCGAATTTAACTTGATTGCGTCTGGTGATAACAGCATTCGGGTTCTCAAAAGAGTTTATCTCGTTTTTGAAGACCATGAAATCTCCAGAGTCATCCATCGTAGTGCCACAGGTGTTGAGGGACATTGTTCCCAGGATGTGGGTCTGATTGGAGGTAAGAGAGCAGGTGGGGTCTCGCAGTTTTAGCCAGTCCTGGTCAATGCCATCCATGGAGGCTTTACTGACCACAATGCTGATACTGTTATTGTCACAGATGACCTTTGCTTCACCTGATAAAACCCTTGCTTTTGCCACAACCACAATAATGCACCTCATTTCTGACTGACTGTTAAGTGTTTCTGCTGTGAAACACAAAGGTACATGACGATACAGATCCGTCTCCTGTGGAATCCAGGTCAGTGTTGCCATCATAACCCCATTACTTAAACTTGTCAGGGTCTTAGACATATTAGAGGGGCCACTGACCTGGAAGTCAAAGATGCTGTTGTCTGAGACCTGTGCTCGGAGGGTGATCTCATGAGCCTGTCCCACAGCAGCATGATGCACATCTCCATGCAAAGGAGTTGGTGTCAAGAAACTTGGCTTGTTCACACCTGGCACGCAACCCTGGGCTGGTGGAAGAATTTCAACTCCAAACTGCAGAGGCACTTGACTGAGAGCAGTTGGATTACTGTCTGATGCATTACTGACTGAGAGGACCCCATTATCTCCCATCACAGTTATGTTTGAAACAGGATAATCCTCCAGGATGAGCTCAAACACGTGCATACCCAGAGCCAGTGAGTCACCTCTGTGCAAAGTGCATGATTCCTCGTGAAGATGTATGTTTGGATGTTGATTGGTGTCATTAAACCTGCATCTCACAACATCGTCATCTGGGTCATGTGACAGCAACTGAAGGTTCTGGAAGCAATTCTGAGGAATCCTTATGTTTGGAATTGCTGCTGAAACAGGGGATCTGTTTGGAGACTGAGTGTCGGATCGTCGGCCAGTGTCAACATGAGTGCGAAGGGTCCATCCACTGACACCCTGAACATTATCCTCCCAGCAACAACCAGAGGAGCTCAGAATGAAGGGACCATTAGTAGTGACATTGGTGGCCATGTGAACCTCTGATTGGCACCACAGACCTTCAGGTCCGCTGTCTGTCACCATAGCTCCTGTGTTGGTGAGGACGCCACAGGATCCACTCTCACAGATCCAATTGATTTGAGAACCACAGGGACCCCTGCTGGACTCTCTGTAGTAAAACTGCATCTCCACTGATCCATCTGGAAATCTGTTTCCAGGCGTGAACGTTATGGAACCCCCGTAGAAACCTACGGCTGGTCCCACAGCGAGAGTCAAGCTAATCAGCAGCAGCATCGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96598 True 2507 TUCP 0.46 13 12365049 12375905

Neighbor

gene id symbol gene type direction distance location
CI01000013_12314589_12315317 RGS9BP coding upstream 49540 12313175 ~ 12315509 (+)
CI01000013_12272623_12275499 NIP7, NIP7.L coding upstream 89328 12272623 ~ 12275721 (+)
CI01000013_12260938_12264631 NA coding upstream 100418 12260938 ~ 12264631 (+)
CI01000013_12099659_12100829 GCSHA, GCSH coding upstream 263773 12097363 ~ 12101276 (+)
CI01000013_11937264_11960076 IQSEC3B coding upstream 404723 11936811 ~ 11960326 (+)
CI01000013_12379804_12398839 NA coding downstream 3616 12379521 ~ 12398839 (+)
CI01000013_12459982_12465113 PDCD10, PDC10, PDCD10B, PDCD10A, PDCD10.S coding downstream 84077 12459982 ~ 12465573 (+)
CI01000013_12536762_12549569 NA coding downstream 160857 12536762 ~ 12550015 (+)
G84820 NA non-coding upstream 131265 12233246 ~ 12233784 (+)
G84775 NA non-coding upstream 226939 12137191 ~ 12138110 (+)
G84769 NA non-coding upstream 233515 12127831 ~ 12131534 (+)
G84741 NA non-coding upstream 269590 12047870 ~ 12095459 (+)
G84736 NA non-coding upstream 324136 12039518 ~ 12040913 (+)
G84867 NA non-coding downstream 984 12376889 ~ 12377247 (+)
G84879 NA non-coding downstream 43998 12419903 ~ 12420119 (+)
G84898 NA non-coding downstream 100746 12476651 ~ 12476877 (+)
G84899 NA non-coding downstream 102348 12478253 ~ 12478528 (+)
G84919 NA non-coding downstream 146969 12522874 ~ 12524980 (+)
G84790 NA other upstream 163074 12184942 ~ 12201975 (+)
G84768 NA other upstream 194231 12169989 ~ 12170818 (+)
CI01000013_10756927_10790192 FRMD4A other upstream 1580292 10756927 ~ 10792761 (+)
G84250 NA other upstream 2149087 10215127 ~ 10215962 (+)
G84215 NA other upstream 2285713 10076454 ~ 10079336 (+)

Expression


Co-expression Network