CI01000016_06905366_06911635 (KIFC3)


Basic Information

Item Value
gene id CI01000016_06905366_06911635
gene name KIFC3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 6905315 ~ 6911635 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_06905366_06911635.mRNA
GAAAATGAGAACTTGCGCAGTCGTGTTCTGCAGCTGGAAAGTTCACTGCAGCAGCGGGCAGAGCAGCTGTCACGTCTGGAGCACCAGAAGGAGCAGAGCGAATGGAGGAAGACAGAAGAGCTCAGGAGACGAGAAGAGAGCGTGAGAGAGCTGCAGCTTGAATTAGACAAAGAACGCAACAAGGAACCTGTGGTTAAATATGTTACACAAACCGTGGAGGTGGAGTCACCTTCAACTCTACGTCAACTATCTGAAGCCAGACATCAGAATGAACAGCTTTCTGAGAAGCTAAGCAACCAGAGAGAACGATGCCGACAGTTGGAGGAGAACATCAGACATTCTGATGAAATTGCTGCATATGAGAAGGAGATTGGGACCCTGAGGGAGGAGCTGCTGAAGGAAATTGGACATCTTGAGGAAAAGAAAGAGGCAGCCGTAAAAGCGGCAGCCAACTGCTCTGAGGAGCATCTCCAGAGCCTGCAGACCCAGTTCATAACCCTCCAAAAGCGTCTGAGTGCTCTCCCTCCCACGTTACGCTCCATGAAGACCGACTACGCCAGCTTGCGCAGTCAGGTCCGCAACTTTTCCGACTTCTATGGAACAGCTATCAAAGAAGCCAAGAAACAAATAATGGCAGCTATAAATGAGATGTCAGAGGCCAACAAAGACCTTTTAGAAAAATACAGAAAGGAGGTAGCGCTCCGCAGAAAGTACCACGAGCAGCTGGTTGAGCTTAAAGGTAATATCCGTGTGCTGTGCCGCGTAAAGCCAGTACTGAAGGAAGATCAACATGAGGAAGGCCAAGCGGTAGTTGTGACAACAGACCCCAATAATGAATCTGCACTCACAGTTTTAAGCAAGGGAAAGCCCAAAAACTTTGAGCTGGATAAAGTCTTTCACCCTCAGGCCACTCAAGAAGAGGTGTTCCAGGAAATTGAGCCACTCATCACATCCTGTATAGATGGGTATCATGTTTGCATCTTTGCTTATGGCCAGACAGGATCTGGCAAGACCTATACTATGGAGGGTACTGTTGAGAACCCCGGCATCAACCAACGAGCCCTGAAACACCTGTTCAATGAGATTGAGGAAAGAAAAGACATGTGGACGTACAACGTCAGTGTCAGTTCAGTGGAAATTTACAACGAGGTCCTGAGAGATCTACTCAGTAAGGATGGAGAGAAGCTTGACATTAAGATCAACCCTGATGGGACGGGTCAGCTCCATGTGCCAGGACTGAGGGTCATGGAGGTCAAAAGCTTCCAGCATATCAAGAAAATTTTGGCCATAGCTCGAAAGAACAGGATTACATTTGGAACGCAGATGAACCAGCATAGCTCTCGATCACATGCCTTGCTCACTGTGACTGTGCTGGGCACAGACCTCGCCAGTGGAGCCAAAACCACCGGCAAGCTGAATCTTGTGGATCTGGCTGGTTCTGAGAGGGTGTGGAAGTCTGGAGCAGAGGGGGAAAGACTGAAGGAAGCCCAGAATATCAACCGCTCACTGCTGGCTCTAGGAGATGTGATCCAAGCTCTCAAGGCCCACCAGACTCACATACCCTTCAGGAACTCACGACTCACCTACCTGCTGCAGGACTCACTGGGAAAAGGCAACAAAACTGCCATGGTTGTTCAGGTTTCATCTCTTGAGAGCAACGTCGGAGAGACCCTGTGCTCGCTAAAGTTTGCCCAGCGAGTGTGCAAGGTGGAGCTGGGCCCTGCTGCACGAAAAATTGAGACGGGAGGACATAATGAAAACAAAAGTTAATGCATACCTTCAACCCTCACAAGTAACCACAGGACCAGAAATGGCATTAAA

Function

symbol description
kifc3 Predicted to enable ATP binding activity; microtubule binding activity; and minus-end-directed microtubule motor activity. Predicted to act upstream of or within microtubule-based movement. Predicted to be located in microtubule. Orthologous to human KIFC3 (kinesin family member C3).

GO:

id name namespace
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10406 KIFC2_3; kinesin family member C2/C3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_06905366_06911635.mRNA True 1821 mRNA 0.49 12 6905315 6911635

Neighbor

gene id symbol gene type direction distance location
CI01000016_06814184_06871990 NBEAL2 coding downstream 33325 6814024 ~ 6871990 (-)
CI01000016_06788704_06796860 NRADD coding downstream 108455 6788672 ~ 6796860 (-)
CI01000016_06743403_06745585 NA coding downstream 159542 6743024 ~ 6745773 (-)
CI01000016_06729420_06733577 UPP1 coding downstream 171738 6728777 ~ 6733577 (-)
CI01000016_06720165_06726223 STMN2A, STMN2B, STMN2 coding downstream 179092 6719505 ~ 6726223 (-)
CI01000016_06963083_06974158 NA coding upstream 51448 6963083 ~ 6974188 (-)
CI01000016_06975396_06992012 NA coding upstream 63382 6975017 ~ 6992012 (-)
CI01000016_06998707_07047702 NA coding upstream 86899 6998534 ~ 7047702 (-)
CI01000016_07056612_07073504 NA coding upstream 144747 7056382 ~ 7074008 (-)
CI01000016_07088885_07090963 NA coding upstream 177053 7088688 ~ 7091043 (-)
G97530 NA non-coding downstream 99977 6804934 ~ 6805338 (-)
G97428 NA non-coding downstream 177806 6727127 ~ 6727509 (-)
G97517 NA non-coding downstream 262510 6642270 ~ 6642805 (-)
G97516 NA non-coding downstream 263203 6641867 ~ 6642112 (-)
G97468 NA non-coding downstream 418112 6486730 ~ 6487203 (-)
G97545 NA non-coding upstream 32710 6944345 ~ 6944646 (-)
G97557 NA non-coding upstream 134022 7045657 ~ 7045896 (-)
G97558 NA non-coding upstream 134454 7046089 ~ 7046309 (-)
G97559 NA non-coding upstream 140555 7052190 ~ 7052836 (-)
G97341 NA other downstream 745594 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 1487098 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 1574469 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 1981911 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 2974264 3920055 ~ 3931162 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 1977198 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 2025154 8925960 ~ 8945229 (-)
G98679 NA other upstream 2323361 9234996 ~ 9239929 (-)
G98691 NA other upstream 2344467 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 2597987 9509622 ~ 9512428 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location