XLOC_007978 (slc25a43)


Basic Information

Item Value
gene id XLOC_007978
gene name slc25a43
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 32884731 ~ 32893785 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015596
GACAAGTTACTCTGCAGCTGGACGGCTGTATGATAAACAAAACCGTTAGTGTGGTCATTCCCacatctgttgtttttatgtGAACGGTTAAAGGGGGAATCTTTCGAATGAAGTATGGCAACAGTCAAAAAGGATGCTCGACTGACGAGTTCGCAAAGTTTGATGTGCGTCGGTTTTGCCGGGATTTTTAGCAAAACTGTAACTTCGCCGTTGGAAGTCGTCAAGATTTTGAGCCAAGTAGGAACATTTCACTGTAAACGCGGCTTCCTGGACAGCTTTGTTTTAATTTGTCAGAATGAGGGACTTCGAGCATTTTGGAAGGGTAACATGGTTTCCTGTCTACGGCTGTTTCCCTACAGTGCCATACATTTAGCAACGTACAAAAATATTGTGAACCTTCACGTAGATGAACTGGGTGATATCTCACAATGGAGAGCCATAGTGGCCGGTGGACTGGCAGGCATATCTGCAGCTCTAGCAACATATCCACTGGAGGTGGTTGAAACCAGACTTATTGCTCAGAATTGCCAAGAACCAACGTACAGAGGCTTGCTGCATTCTCTCTCTGTCATATACAGAAATGAAGGACTTCAGGCTCTCTACAGGGGCTTCTCCCTCACAGTTTTGGGTGCTGTTCCCTTCTCGGTTGGCTGCTATGCAGTTTATATCAACTTGGATAAATTGTGGCAGGAGCGTCATGTTCGCTTCACGTCTTTGCAGAACTTCATCAATGGCTGTCTTGCGGCAGGAGTCGCTCAAACTCTCTCCTTCCCCTTTGAAACTGTGAAAAAGAAAATGCAGGCTCAGAGTCTTGTTTTGCCCCACTGTGGAGGAGTTGATGTCCATTTTAAGGGCATGGCAGACTGCTTCAGACAGGTCATCAAGAACAAGGGTGTCATGGCTCTGTGGAGTGGCCTTACAGCCAACATGGTGAAGaTTGTCCCATATTTTGGCCTGCTCTTCAGTTGCTTTGAGATGTGTAAGCAGGTCTGCCTTTACCGGAACGGCTATATCATTTCTCCACTAAGCTATAAGCTTAAACCTGGTGTGGACCAAAGCCTAGGCCCATATGAACTGCAGGAATTTAAGCGCTACCTAAGAAACAGAAAATCACACAAAGCACAGAGTTCATCAATAGGAAACCGTTGGTAAAAAACATCCAAGAAGATTATCAGGAATGAACAGACCTCCAAGAATGTCTACTGCTGCAGTGCAGTATTTTGTGAAGTATATTTGATTATTATGAAGAACATGTATTGTATTTAACATCCGACAGGCTGTTTTTggaataatgcatttatttacttgaaGCACATCCATTatgtacattttacaaaaacaatgagACAGGTCCTTAATGGAAAGTGGTGCACCTGTGAGGCAGTATTTAAGGTGCTTATTGATAACAATGTTGACATGTATTGCTTTTACTGTATGTGCTACTGAAATGGTGTTTTAAGAAGTGTGGAAAAGTTTTAGCATTTCTCAGGAATAATGTTGAGCATCATTTTAACAGTGTAAAGCAATGCCTTTGTCAAACAAAGTTTTCGTATATTTAGTATATACAAAGTTTTTACGGTATTTTACCTCACATGCCTTTTAAAGGTATTTTGTTTATAAACCACAAACTTTTCATGTCATATTGTGGTGGATTTTAATATTGGTTTATTTGATAATGGTTGAGAGTATCTGCATTGTAAAGAATTGTATATACTCTGCGGATCTGGACACACAGTAACCCAGGAACCACTGACTTTGAATCAGATATTAgcatatttgaatattaaaagGGTGTATCGTAAAGACCTCTCTTATTTAACTATAAAAGTagcttacattgtaaaaaaatatgaaaagcaATAAACATAACTTTATGTTA

Function

symbol description
slc25a43 Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A43 (solute carrier family 25 member 43).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0005347 ATP transmembrane transporter activity molecular_function

KEGG:

id description
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-030616-69 Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A43 (solute carrier family 25 member 43).

Ensembl:

ensembl_id ENSDARG00000102048

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015596 True 1879 mRNA 0.40 5 32884731 32893785

Neighbor

gene id symbol gene type direction distance location
XLOC_007977 slc25a5 coding downstream 593 32881625 ~ 32884138 (-)
XLOC_007976 si:rp71-46j2.7 coding downstream 8451 32866748 ~ 32876280 (-)
XLOC_007975 ube2a coding downstream 18304 32859430 ~ 32866427 (-)
XLOC_007974 inppl1b coding downstream 60323 32793272 ~ 32824408 (-)
XLOC_007973 AL590151.1 coding downstream 95143 32773672 ~ 32789588 (-)
XLOC_007979 BX247946.1 coding upstream 19895 32913680 ~ 32918834 (-)
XLOC_007980 chic1 coding upstream 58057 32951842 ~ 32959851 (-)
XLOC_007981 cdx4 coding upstream 67933 32961718 ~ 32965169 (-)
XLOC_007982 kdrl coding upstream 89984 32983769 ~ 33044955 (-)
XLOC_007983 CR812836.1 coding upstream 154734 33048519 ~ 33050080 (-)
XLOC_007641 CU855896.1 misc downstream 30476891 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 30477300 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 30477659 2406945 ~ 2407072 (-)
XLOC_007971 NA non-coding downstream 129661 32664629 ~ 32755070 (-)
XLOC_007968 NA non-coding downstream 449425 32432448 ~ 32435306 (-)
XLOC_007966 NA non-coding downstream 750694 32068804 ~ 32134037 (-)
XLOC_007963 NA non-coding downstream 995471 31881282 ~ 31889260 (-)
XLOC_007999 NA non-coding upstream 571163 33464948 ~ 33467691 (-)
XLOC_008004 NA non-coding upstream 772297 33666082 ~ 33778252 (-)
XLOC_008005 NA non-coding upstream 828257 33722042 ~ 33744753 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000000_11603826_11605350 SLC25A43 coding CI01000000 null 11603800 ~ 11605350 (-)