Gene
RNA
| Item | Value |
|---|---|
| gene id | G105071 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 3672631 ~ 3672841 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119427 | True | 211 | lncRNA | 0.38 | 1 | 3672631 | 3672841 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_03570664_03575338 | CSRNP1B, CSRNP1 | coding | downstream | 97293 | 3570177 ~ 3575338 (-) |
| CI01000018_03108551_03121242 | CPA6 | coding | downstream | 551389 | 3107090 ~ 3121242 (-) |
| CI01000018_03035039_03102978 | ARFGEF1 | coding | downstream | 569027 | 3034649 ~ 3103604 (-) |
| CI01000018_02950311_03005969 | KIAA1468 | coding | downstream | 666427 | 2949847 ~ 3006204 (-) |
| CI01000018_02931983_02940190 | NA | coding | downstream | 732211 | 2931926 ~ 2940420 (-) |
| CI01000018_03727931_03736733 | SLC22A13 | coding | upstream | 54943 | 3727784 ~ 3737067 (-) |
| CI01000018_03745369_03779384 | OXSR1, OXSR1A, OXSR1B | coding | upstream | 72528 | 3745369 ~ 3779384 (-) |
| CI01000018_03795661_03800529 | MYD88 | coding | upstream | 122685 | 3795526 ~ 3800529 (-) |
| CI01000018_03802116_03809432 | CRY-DASH | coding | upstream | 128845 | 3801686 ~ 3809432 (-) |
| CI01000018_03814990_03841716 | MAP3K20 | coding | upstream | 141950 | 3814791 ~ 3841716 (-) |
| G104144 | NA | non-coding | downstream | 376224 | 3295267 ~ 3296407 (-) |
| G104121 | NA | non-coding | downstream | 407922 | 3219136 ~ 3264709 (-) |
| G104115 | NA | non-coding | downstream | 464811 | 3206380 ~ 3207820 (-) |
| G104099 | NA | non-coding | downstream | 470024 | 3175324 ~ 3202607 (-) |
| G104084 | NA | non-coding | downstream | 567055 | 3105298 ~ 3105576 (-) |
| G105072 | NA | non-coding | upstream | 5 | 3672846 ~ 3673062 (-) |
| G105077 | NA | non-coding | upstream | 6463 | 3679304 ~ 3679981 (-) |
| G105079 | NA | non-coding | upstream | 8351 | 3681192 ~ 3681511 (-) |
| G105084 | NA | non-coding | upstream | 18242 | 3691083 ~ 3691358 (-) |
| G105090 | NA | non-coding | upstream | 30603 | 3703444 ~ 3703899 (-) |
| G104968 | NA | other | downstream | 172117 | 3482104 ~ 3500514 (-) |
| CI01000018_02389202_02488018 | CNTNAP2, CNTNAP2A | other | downstream | 1271728 | 2389201 ~ 2488018 (-) |
| G103842 | NA | other | downstream | 1712573 | 1959497 ~ 1960058 (-) |
| G105104 | NA | other | upstream | 334856 | 4007697 ~ 4017817 (-) |
| G105200 | NA | other | upstream | 570626 | 4243467 ~ 4246010 (-) |
| CI01000018_04856240_04875704 | DAP | other | upstream | 1182240 | 4855081 ~ 4876532 (-) |
| CI01000018_06021105_06025859 | NA | other | upstream | 2218495 | 6020861 ~ 6025876 (-) |
| G106538 | NA | other | upstream | 2857606 | 6530447 ~ 6533512 (-) |
