Gene
RNA
| Item | Value |
|---|---|
| gene id | G105079 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 3681192 ~ 3681511 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119435 | True | 320 | lncRNA | 0.42 | 1 | 3681192 | 3681511 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_03570664_03575338 | CSRNP1B, CSRNP1 | coding | downstream | 105854 | 3570177 ~ 3575338 (-) |
| CI01000018_03108551_03121242 | CPA6 | coding | downstream | 559950 | 3107090 ~ 3121242 (-) |
| CI01000018_03035039_03102978 | ARFGEF1 | coding | downstream | 577588 | 3034649 ~ 3103604 (-) |
| CI01000018_02950311_03005969 | KIAA1468 | coding | downstream | 674988 | 2949847 ~ 3006204 (-) |
| CI01000018_02931983_02940190 | NA | coding | downstream | 740772 | 2931926 ~ 2940420 (-) |
| CI01000018_03727931_03736733 | SLC22A13 | coding | upstream | 46273 | 3727784 ~ 3737067 (-) |
| CI01000018_03745369_03779384 | OXSR1, OXSR1A, OXSR1B | coding | upstream | 63858 | 3745369 ~ 3779384 (-) |
| CI01000018_03795661_03800529 | MYD88 | coding | upstream | 114015 | 3795526 ~ 3800529 (-) |
| CI01000018_03802116_03809432 | CRY-DASH | coding | upstream | 120175 | 3801686 ~ 3809432 (-) |
| CI01000018_03814990_03841716 | MAP3K20 | coding | upstream | 133280 | 3814791 ~ 3841716 (-) |
| G105077 | NA | non-coding | downstream | 1211 | 3679304 ~ 3679981 (-) |
| G105072 | NA | non-coding | downstream | 8130 | 3672846 ~ 3673062 (-) |
| G105071 | NA | non-coding | downstream | 8351 | 3672631 ~ 3672841 (-) |
| G104144 | NA | non-coding | downstream | 384785 | 3295267 ~ 3296407 (-) |
| G104121 | NA | non-coding | downstream | 416483 | 3219136 ~ 3264709 (-) |
| G105084 | NA | non-coding | upstream | 9572 | 3691083 ~ 3691358 (-) |
| G105090 | NA | non-coding | upstream | 21933 | 3703444 ~ 3703899 (-) |
| G104963 | NA | non-coding | upstream | 129900 | 3811411 ~ 3812546 (-) |
| G105115 | NA | non-coding | upstream | 403032 | 4084543 ~ 4085146 (-) |
| G105140 | NA | non-coding | upstream | 405015 | 4086526 ~ 4086789 (-) |
| G104968 | NA | other | downstream | 180678 | 3482104 ~ 3500514 (-) |
| CI01000018_02389202_02488018 | CNTNAP2, CNTNAP2A | other | downstream | 1280289 | 2389201 ~ 2488018 (-) |
| G103842 | NA | other | downstream | 1721134 | 1959497 ~ 1960058 (-) |
| G105104 | NA | other | upstream | 326186 | 4007697 ~ 4017817 (-) |
| G105200 | NA | other | upstream | 561956 | 4243467 ~ 4246010 (-) |
| CI01000018_04856240_04875704 | DAP | other | upstream | 1173570 | 4855081 ~ 4876532 (-) |
| CI01000018_06021105_06025859 | NA | other | upstream | 2209825 | 6020861 ~ 6025876 (-) |
| G106538 | NA | other | upstream | 2848936 | 6530447 ~ 6533512 (-) |
