CI01000021_02104468_02137901


Basic Information

Item Value
gene id CI01000021_02104468_02137901
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 2104098 ~ 2139909 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_02104468_02137901.mRNA
ATGGCTAGAGGCAGGAAGCTGAATGATGGCTGAGTGTGTGCCTCCTGCCAATGTCACCTTAACGTGTTTCACTGCTGCAGAGAAAGACGCTTCTTTTTGTACAAAGACTCTAAGGGCCAGATTTACTAAACGGGGCAAATTAGCGTGACAAATGTGCTGATGGGAGTGACAAGTTTTGCGCGTGATCTACTGCTGACGCGCAAATTAAAGAACACAGTCGCAGTCAAATCATTTACATATTGACCAACGCAATCTAACAAGAGCAGCGCAAATTAGCGTTGAGTCGCAAAAAAGCAGAGCTGATGCTCATCAGGTGCGGGTCGACACAGGTGAAACTTGTTACATGTAATATACGGATAACGTCTTCCTCTGGCATTCCAAAGAAATTAATACGAGTGGATAATATTTTCTTCTTTCTACCACGCTGTCTGTTCTCTGCGGTGTCTCCTCCTAGCAGCAACAATTGCAGCCATGTCGTAAAATGGGTTAAGACATGCTTGTTTTGGGTGTTAAGTAATGGCGCAAACACCAGTAAATTGACTAGCGCAAACATTAGTAAATTGCGTTGCGTGATTCATTTAAATACTCTCCTCCCATAAATTTTGCGTCTGAATGGGAAACTCCTACAAATGCATATGCAATAAGGTCAGCCGCAAAAACAACTCAGTTCACGCCTTTTCAGCGCTAATTTTGCACTGCGTGTCTTTAGTAAATCCCGACAGTAGTTTTTTAACGCCAAAAGAGGGTTTGCGCTGGCGCAAGCTGTTAGTAAATCTGGCCCTAAGTGGTTGACCTGATTGGTTCAGACCTTCCTCAATTGCTCAACTTTGTCCAATAGTTTTGTATCATATGATAACATTTTACTTTCTGACTTTTTCTGCTTTAATAAGACCCGTATCATGATTAGTTTTGCTCATAATTTGGGTGAAAGATATTTCTGAAGTATTAAACTTTGGCATAGAATGATACCAAAGAATAATAACAATTTTAATAATATTACTGAATTCTATTTATCTTCCAGAAATTATTTTAATAATGCTTTGGCTTTAAGACAGTATACTGTATAATAATTGAAAAGGCAATTATTCCTTTTTTAAATGTATTTTTGCATCCGTCACAGTTAAGATATTATGTATAACACATTTTTTAAACCTTATTTATTTATTTGTTTGTTTGTTTTTCCAGATAATATTTTATGAATGTGCTTTGGCTTCAAATCAAGTATTTAACAATGTAAAAAGCTATTTAAAATAAATAAATAAATTATATACACTATTTTTCGCAATGGGTCTTTATACATGAAAATAAATATCTGCCTTTATATTTCATAAAGTGGGTCCCTCACAAGAAGAATGAAAATACATTTTACAAAATATATTTTTAAAGCTGTCAGAGTTGATTATTATTAATATTATTATGTTTAACACATTTACCAATTTTGATTAATTACAGATTTTATTTATTTATTTATTTTTGTATTTACTTATTTTCCAGATAATATTTTAATAATGCTTTTGCTTCATTATGTCAATTATTTATTTTTTAAATGTATTTTTACAGCTGACAAAGTTAACATATTATTAAGTTTAACACGTCTGCCAATTTCGATCATTTTATTTATTTATTTTTCAGGTAATAATTCAAAAATGTGCTTTGTCTTCAATACAGTGTATAAAATAATTTATTTAAGAAACATGTTGTGTTTAGAATATTAGACTTACTATTTTCCTAAGACATTGAAAATATGTCTGCCTTTATATTTCAGAAATGGGGTCCTTTGCAAGGTGATGATCACTATATTTGGGGGTCCTTGGGATCAAAGCACTTTAAAAACCCTGTTTTTAGAAAACTTGGGGATGGGCTCTTTTGACTTGGTGCAGTAAGCATGCACCTAGAAACCATCTAGAACACCCTAGCAACACATTAAAAGCACTCGGAACACCTTAGCTACAAGATAGCAACACCCAGGAACCCACCCATCTTGGCAGTTAAATAGATCCAATGGAGAATGAAAGGATATTATTTGAGGATAGGGAGTGGTAATGACATCGGGATGCGTCGCATGCCATGCTTGACCATGTTTAATCCACATGACGTCATAGTACCCTTTGACCCTGATGCTAATACATTTTGTTTACCAAATTTCACACATTGCAGAATAGCACATGCACAAATGTGCCTACGTTTCAACAACTGGCTTCTTGAGGCTGAAAAGAACACCATTTCAACACTCCTTTTGTCTCGGAACAAGGTGGAACCAGACACAACTAGAACAGCTGTGAGCCTGATACTCTGGACTGGCAGGAAGTCACAAGAAATAGAGAGAATTAAAGACAGGCAGGGAGACAAAAACAAAAAGAGATATAAAGCATTGTCACCTGCCTGCCTGACTCAGGGTGTTTTAATGGAGCCTGTTTCACACGTTATGTTTGTTCTTGCTTTCAAGGCTGCTAGCTGCTCTCACCTCGTGCATTATGCATGTAGCCGGACATTGTTAGACAGGCAACGTGGCAGTAAATGTGATTCAATGAGTTCATGTGATTCAGTATACGAGTCCATTTTTGGTGTTAATGGACAGGAAAGTGGACACTGGCCAAAGATCGGAATTTTAGAGCTGTTAAGTAATATGTCATGGATCTTATTTGCCACTGTACGTATATGGTTTGTGCATCTCCACTGGTTGTCTGGAGAAGAAATCATCTCATCATTATTTGGCTGTTGCCTGGATACTAGGGCCGTAGAGGTGGCCTTGACCGTGAGGAAAATGAAATGGCCAATGCTAATGGCTATCAGGAGACAAGCTTCAAAGCCTCCAGGGTCCAATCTGACGAGTGTAAACAACGTTCTCATAAACATGAAAAATGTCTCCTCCTCGCAAAACCTTCCTCTACTTCTAAGTGACAAAACTAGGCACAAAAAGCTCTGAGTCTTTTGCTGAATCCAGACCATGGTAATCATAGCGATGAGCTGGAGTGGTCAAATTGGTTGAAAGGGACTAGGTATATTTAGTATGTACTGAAGTACTTCACTGCAGTATTAAGAGGCTGAGCTTGCTTCCTGTTCTGCTTGTCACTCTTGTTAACAATTATTTTTGTCTTAGTAGGCGCATTTTTCAGAGCAGTACGCTATGCTATGCTTCCCTACTTCCCTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGCATGTGTATTAGTGTTGTCAATCAATAAAAAATAAAAAATAAAAAAAAAACTGATTAATCACACATTTTCTGTAATTCAGTCAGGACCACTTAAGTCAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_02104468_02137901.mRNA True 3296 mRNA 0.37 6 2104098 2139909

Neighbor

gene id symbol gene type direction distance location
CI01000021_02045322_02085906 NA coding downstream 17861 2044938 ~ 2086237 (-)
CI01000021_02005120_02042997 SULF2B, SULF2 coding downstream 60931 2004826 ~ 2043167 (-)
CI01000021_01922936_01956597 NA coding downstream 147501 1922719 ~ 1956597 (-)
CI01000021_01910328_01917171 NA coding downstream 186351 1909361 ~ 1917747 (-)
CI01000021_01805603_01824428 NDRG3, NDRG3B coding downstream 279670 1805370 ~ 1824428 (-)
CI01000021_02191178_02193192 NA coding upstream 50135 2190044 ~ 2193348 (-)
CI01000021_02290326_02297117 EEF1A1, EEF1A2, EEF1A1A, EEF1A2.S coding upstream 150034 2289943 ~ 2297117 (-)
CI01000021_02299075_02305974 MRGBP coding upstream 158515 2298424 ~ 2305974 (-)
CI01000021_02309119_02315738 NA coding upstream 169115 2309024 ~ 2315738 (-)
CI01000021_02317457_02320931 HAUS8 coding upstream 177548 2317457 ~ 2321663 (-)
G116805 NA non-coding downstream 292759 1810846 ~ 1811339 (-)
G116834 NA non-coding downstream 316416 1787299 ~ 1787682 (-)
G116833 NA non-coding downstream 317125 1786218 ~ 1786973 (-)
G116802 NA non-coding downstream 335031 1764802 ~ 1769067 (-)
G116819 NA non-coding downstream 366631 1736952 ~ 1737467 (-)
G116847 NA non-coding upstream 47669 2187578 ~ 2187818 (-)
G116848 NA non-coding upstream 47955 2187864 ~ 2188492 (-)
G116872 NA non-coding upstream 110893 2250802 ~ 2251285 (-)
G116889 NA non-coding upstream 188154 2328063 ~ 2329874 (-)
G116891 NA non-coding upstream 190317 2330226 ~ 2330431 (-)
G116730 NA other downstream 741294 1361878 ~ 1362804 (-)
G116856 NA other upstream 70012 2209921 ~ 2210496 (-)
G116893 NA other upstream 191405 2331314 ~ 2334316 (-)
G116997 NA other upstream 572876 2712785 ~ 2713247 (-)
G117683 NA other upstream 751951 2891860 ~ 2892359 (-)
G117893 NA other upstream 904110 3044019 ~ 3044787 (-)

Expression


Co-expression Network