CI01000021_02191178_02193192


Basic Information

Item Value
gene id CI01000021_02191178_02193192
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 2190044 ~ 2193348 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_02191178_02193192.mRNA
TCTTCCCTACTGATGGGCTTTGGCTTTTACTGGACACTGTGCAGCAATATGACCCGCTGTGCCACAGTATAAACACAGTCCCTGGGTCCTGCGTCTCTCTTTCTCCTCCCGAGAGAGATGAGTTCTGCCTACCTGCATGGGCTCAGGATCAAACACATGACCAACCGTATCACTGGAAGTGGCAGAGAATTGATCCATGGAATTTATGACCGGGTTCTGCAGGACGCGTTGATCGACATCGCAATCTGGCGTCAACTCGGATTGCCACATCGAGCAATCCGTCAAGGGTGGTGGGCAGTTTCAGCATGTAGATCTTGTTGTGGATGCGCCGCTCGACCAGACAGCAGTGTAATGTGTAGCGAAGCCTGGAGAGCAATATACAGAGAACACTTTGCCAAAAAAGAACGACACAACTGGGGCTCACCAGAGTATGCAGTTGGAGGTGGCAGACGGGGCTCAGCATTGCGGCCAACAGGTGGAACAGCAGATACCTGTGCTACTAGCACCTGGACAGCGCGACCAGTAGCCATAATCTGCTTGTCCTGTCATTCCATGCGTGCATTGCTGCTCGTCATAATGTCCCTTAATTCTGATGCACTCACTGGATTCATTGTAGGTCAGATCGTTCTGTCAGGAAATAAAAAACTCAAGCAAAAGAAGTTGTATGCATCCATAGCAGACACCAGTCTCACTGAGACTGTGAAGGTAGAAATAATCCACACCAAACTGGTAGGTCCAAACGTAGCAGGTAAATCCACACAAGAAAATGTTGGGAGGAAAAACTGTGGTATAATGGATTCAATAATAGCGCCCTCACAAACTGGCCTTGTTAGTAGCGTGTTTGTATATATGGGAGGGGATGTGATTACGGTCCGCCAAGCCTGCCAATAGCGTGTATTTAGCTGAGATGAAGAGTGGGTGCACATTGCCTGCATGTCTGGCGGCGATGCACAATTGTGCAATGAAATGCAGAGTATTTGGGAGACAGTAGCAGTGGTTTCCTGTGCCAAAGTTGGTTGGCATTGCAAATTGCATCACTGAGTCCATCAATTTTAGCTCCCATATAACATTACAACCACTTAGTATAGTCACTCAGACCATTAGCGATCACATCCCTGTGTAAATTTCACTTCCTCTCTGGGTTCAGAGGTAATGTTTTTTTCACTGTAGTGTTTTAAAAACCCTCAATCAGACAAGTGGACATTTTATGCTTTTGAGGGTTTCGTATCTGCATAACACACTCAGATGAATTTGGTCTTAAGTGAAGCCCTCCAATTTTATCCAAACTCCACAAGAATCAACAGCTTCCAGTCAACATATTTTGTGTTGTAGGATCAGTTCAATTAGCATGTCCAAAGGCAAAATGACAGAATTAGAAACTTAAACCTGCTCATGTGTGAGGACGAACAGTTAAATTGGTGCCGTGACCCGGATGGAAGTGAGGTATAGGGGGGTGAATATAATGGAGGCCTGTGCAAGTGAAGGCTTAGATATACTCACAGCGGCTTTTTCGTTGTCCTTTTTTAGCGTGCCTGCCTCCCATGCCGGTGGCGCTGGTTCGAATCCTTTTCGGAGCGATTATGAGTAGGACCAGTCACATATAGGGCGGGACTGTCAATGAAGCAAAATGCAGAACCTGATTTCACTAAGTCCAACATACAGGTTGTCATCATACAGGTTTGAAACAACATGAAAGTGAGTAAATGATGTTGAGTTGTTCATTTCCTGAGCAACAGCAACAGTTGCCAAGGGAATTGATCCGCCGCTTGATACATTTAGAAACATTGGTATTCGTACATTTTTATACAATCTCATTACACCCCAGTGACAGTTAGGTTTAGGGGTGGACATTCATGCTTACTTTATTTTCTAAAAATCATATGTTTTCGAACCACAACATGAATTAATACAAAATTGCCACTTCGTAAAATAATCATGTTTTTCTATGTGATCATGCTGGAATGCAGACTAGAAACCAACAGTACAGTAACCTCCAATAATTTAAGTGCTGTCAGTGTGAATAAA

Function

NR:

description
gag polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_02191178_02193192.mRNA True 2025 mRNA 0.44 5 2190044 2193348

Neighbor

gene id symbol gene type direction distance location
CI01000021_02104468_02137901 NA coding downstream 50135 2104098 ~ 2139909 (-)
CI01000021_02045322_02085906 NA coding downstream 103807 2044938 ~ 2086237 (-)
CI01000021_02005120_02042997 SULF2B, SULF2 coding downstream 146877 2004826 ~ 2043167 (-)
CI01000021_01922936_01956597 NA coding downstream 233447 1922719 ~ 1956597 (-)
CI01000021_01910328_01917171 NA coding downstream 272297 1909361 ~ 1917747 (-)
CI01000021_02290326_02297117 EEF1A1, EEF1A2, EEF1A1A, EEF1A2.S coding upstream 96595 2289943 ~ 2297117 (-)
CI01000021_02299075_02305974 MRGBP coding upstream 105076 2298424 ~ 2305974 (-)
CI01000021_02309119_02315738 NA coding upstream 115676 2309024 ~ 2315738 (-)
CI01000021_02317457_02320931 HAUS8 coding upstream 124109 2317457 ~ 2321663 (-)
CI01000021_02335864_02337990 NA coding upstream 142015 2335363 ~ 2341260 (-)
G116848 NA non-coding downstream 1552 2187864 ~ 2188492 (-)
G116847 NA non-coding downstream 2226 2187578 ~ 2187818 (-)
G116805 NA non-coding downstream 378705 1810846 ~ 1811339 (-)
G116834 NA non-coding downstream 402362 1787299 ~ 1787682 (-)
G116833 NA non-coding downstream 403071 1786218 ~ 1786973 (-)
G116872 NA non-coding upstream 57454 2250802 ~ 2251285 (-)
G116889 NA non-coding upstream 134715 2328063 ~ 2329874 (-)
G116891 NA non-coding upstream 136878 2330226 ~ 2330431 (-)
G116900 NA non-coding upstream 137335 2330683 ~ 2331076 (-)
G116730 NA other downstream 827240 1361878 ~ 1362804 (-)
G116856 NA other upstream 16573 2209921 ~ 2210496 (-)
G116893 NA other upstream 137966 2331314 ~ 2334316 (-)
G116997 NA other upstream 519437 2712785 ~ 2713247 (-)
G117683 NA other upstream 698512 2891860 ~ 2892359 (-)
G117893 NA other upstream 850671 3044019 ~ 3044787 (-)

Expression


Co-expression Network