CI01000021_04576127_04585164


Basic Information

Item Value
gene id CI01000021_04576127_04585164
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 4576127 ~ 4585311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_04576127_04585164.mRNA
ATGTGTGATTATCCACGCTTGAACAACAGGTGGTGGATTGACAAGACCACAACAGGCGCAGCAATCTGCATCTGGTTGGATTGCCTGAAGGATCCGAAAAGGACGATGTTTTTTTTTAAAAGATCGCTGCCGACGTGGCTCCCTTCTCTGGCGTGTAGGGAGATTGAAGTGGAACGAGCACAGGGCGTGTACACTAAGGTCTCCTCAGATCGCGCTAAACCTCGGGTCTTTCTCATTAAACTTTTGCGATACACAGACAGGGAGCTCATTCTGCGGGCTGCCAGACTTCATGCTCCGCTGCTCAAGATGCGGATATTTGCTCCTTGTCTCTGTCTGATCATGATGGTAATTTGTACAGATTATCTTTGGTCCCCCGGCCGTCTCGAGCCTCTAGATGGTGATTTAACCCTAAATTGTTACAGGACGAAAGCTTTTGCATTATTTATCTGTCTCTTCTTGAGCATTCATACAAACCCTATTACAACTGTTTGGTCCAAGGATCTTAATGAGGATGTGCATGTTTTATTTTCGGATAAGGGCAGTCTGCAGGATGCTCCAGACATACAGCTACAGTCACCACCCTACCTCTACACTGGCACTTCAAGATTGCTTGGAGAGGCAGAGGGCTGGATGCCCGAGCATCCGCCAACCACCATTGACACTGCTCTCATGATATCTCTGTCTACCGATTGTCATCCCCTCATAAACTCCCCAGAGATGCACGCTAACATCTGCACGACCACTTCCAGACTAATACGCTGGAGGGAGGCCAACACTTTCCTGGTGGGGGCCAGGAATGCATCAAACCATGGCAGTTGTTGTCTGCTTGGTGGAACGGACTGCCTCGGGAGACAGTCTCTTGCTGTGGACCAAGTCCTTCAACAAATCTGTCTGGTAGGCCTGCAGCACTGCCATACTTTACAAGGCCCAACTAGCTTGGCCCGCCGCTGCGTATACCCTACCCACAATGTGTCTGCCATGGCTTAGAAGATAAGACTGGAGTCTTCAAGGAAGACACCATGCCTGGGGAGAGATGGCTCATGAGCATCTTTTTGTACCAAAACTTGCACAGTCCCTTGATGCTACCACGCGAAATGAATATGGTTTCTCCCACGATCTTGTCACTTCTAGATA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107698895

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_04576127_04585164.mRNA True 1134 mRNA 0.49 5 4576127 4585311

Neighbor

gene id symbol gene type direction distance location
CI01000021_04436103_04476829 OPRL1 coding upstream 98816 4435827 ~ 4477311 (+)
CI01000021_04259458_04263656 NA coding upstream 312021 4259157 ~ 4264106 (+)
CI01000021_04219242_04237829 NA coding upstream 338120 4219187 ~ 4238007 (+)
CI01000021_04087145_04091630 NA coding upstream 484301 4085974 ~ 4091826 (+)
CI01000021_03793387_03846383 NA coding upstream 729744 3793387 ~ 3846383 (+)
CI01000021_04614553_04621970 NA coding downstream 28454 4613765 ~ 4622428 (+)
CI01000021_04755472_04758504 NA coding downstream 170161 4755472 ~ 4758654 (+)
CI01000021_04763908_04787185 MYT1B, MYT1 coding downstream 178597 4763908 ~ 4787967 (+)
CI01000021_04795987_04803001 PCMTD2 coding downstream 210676 4795987 ~ 4803104 (+)
CI01000021_04886787_04893309 PLAGL2 coding downstream 301026 4886337 ~ 4893474 (+)
G117644 NA non-coding upstream 105222 4406964 ~ 4470905 (+)
G117641 NA non-coding upstream 174629 4401285 ~ 4401498 (+)
G117638 NA non-coding upstream 182348 4393448 ~ 4393779 (+)
G117608 NA non-coding upstream 278798 4296745 ~ 4297329 (+)
G117435 NA non-coding upstream 332049 4242624 ~ 4244078 (+)
G118374 NA non-coding downstream 13237 4598548 ~ 4598759 (+)
G118405 NA non-coding downstream 48191 4633502 ~ 4633936 (+)
G118409 NA non-coding downstream 54616 4639927 ~ 4640220 (+)
G118416 NA non-coding downstream 76027 4661338 ~ 4661573 (+)
G118450 NA non-coding downstream 130981 4716292 ~ 4716495 (+)
G117493 NA other upstream 540451 4033000 ~ 4035676 (+)
G117484 NA other upstream 618375 3956146 ~ 3957752 (+)
G117202 NA other upstream 1247894 3269144 ~ 3328233 (+)
G117237 NA other upstream 1332763 3237854 ~ 3243364 (+)
G116236 NA other upstream 2278932 2289817 ~ 2297195 (+)
G119701 NA other downstream 2214833 6800144 ~ 6860606 (+)

Expression


Co-expression Network