CI01000021_04763908_04787185 (MYT1B, MYT1)


Basic Information

Item Value
gene id CI01000021_04763908_04787185
gene name MYT1B, MYT1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 4763908 ~ 4787967 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_04763908_04787185.mRNA
TTCCCTCGGAGATTGTTGGACAGGAGCTGAGCTGCCCTACTCCAGGATGCAATGGCTCAGGCCATATCAGTGGCAAATATGCCCGACACAGAAGTGCTTTGAGTTGCCCACTGGCCAGAAAAAGGCGCCTACAGGAAGCAGAGTCAGAGCAACCCGCCTCCAAGAGGAAGTCCCACCCGCTGAAGCTGGCAATGGATGAAGGCTTCAATGCAGAGAGTGAGGGGAGCGGAGAAGAGACGGAGTTGAGAGAGGAAGAGGAGGAAGATGAAGAACGGGCACAGCAGGCTGGCGATCAAGAGTGTGAAGAAGAGGAGCAAGCAAAACAGAACACAGAGAGCATTAATACAGAAGAAGAGGGTGGTGATGAAGAGGAGTGTATCATCATTGAGGCGTCCAGCACAGACAAGCCCAAGCTCTCATCCTCTGAGGATCTCTCCAACTATCAGCACATAGTGGCCAACTCAATGACCCACCTCAACAACCACAACAATGCTCCCACGTCACCACAACTACAACAGACCGTCACAGTGGAAACACAAGATAAAAGCCCTTTTAGAGAACCGGAAGAAGAAGAGAAAGAAGAATATGAAACAGAGGAAACAAGGAACGAAGTAGGAGTTCTGGTGAATGGAGCGATGGGAAATACAGGGGAGATGGAAGATAAAGAAGAGGACATGCGCACTGAGACCCAGAAGGAGTCTGAGATGCAAAAAGGAGAGACGTACAGGGAGGAGTACAATGAAGTTAAGTCTGAAGATGAAGGGGAGAGAGAAGCCCCTTCGGTTATAACTGCCACTCAGGGATCCCACGTAAGGGAAGACTATGTTTCCCACAAACTCACTTTGCCAGAAAGTTACAGCTCCATGGCGGACGAGTCCGAGATGTTCGACATAATGCGGGGGAACCTAGGGTTGCTGGAGCAGGCCATTGCTTTGAAAGCCCAACAGGTCAAAGCTCATCGTGAGCTCAGCCGCATTCCCGAACACCACCGTTTTTTTCCTCTCGATGACCGGCCCGGCAAACACATGGAACATATCCGCAAGAGCTGCTTTGGAAAAGAGAGCTCTAGATCAGAGAAGCGAGAGATCAAATGCCCAACCCCTGGGTGTGATGGAACGGGTCACGTGACCGGACTCTATCCCCACCACCGCAGTCTGTCAGGCTGCCCACACAAAGATCGGATCCCTCCAGAGATTTTGGCCATGCATGAGAATGTCTTGAAGTGCCCAACACCAGGATGCACTGGTCAGGGTCATGTCAACAGCAACCGCAACACACACCGCAGTTTGTCCGGATGTCCCATCGCTGCTGCCGAAAAGCTCTCGAAGAGTCATGACAAGCAACACCTGCCCCAGCCCATGGGCGAGCACATCAAGGGCAGCCCGAACTCTGACCGCGTACTCAGGCCCATGTGTTTTGTGAAGCAGTTGGAGATTCCTCCACACGGCAGCTACAGGCCCAGCCTCGTCCCCGCCACGCCACGCGCTAATCTGGCCAAGGAGCTGGAGAAGTACTCCAAGGTGTCCTTCGATTATGCAAGCTTCGACGTGCAGGTGTTTGGCAAGCGCATGCTCGCCCCAAAGATGCACACCAGCGAAACTTCACCCAAAGCCTTCAAATCCAAACCTCCATTCCCCAGGGCCTCCCCCCCAAGTCCCAGCTTGCACGGTGGTTATGGAAAAAGCTCCTCCAGTGGCTATGATTATTCCCATGATGCCGAAGCTGCCCACATGGCTGCCACTGCGATCCTCAACCTGTCCACACGGTGCTGGGAGAGACCAGAGAACCTCAGCATCAGACACCAAGATAAGAGTATGGAAATTGAGGTGGATGAGAATGGCACCTTGGACTTGAGCATGAAGAAGCCCATAAAGAGAGAAATGGGCATGCCTTGCGCCAGCCCTGAAGTGCGTTCCCCAGATCTGTCTTCATCATCTTCATCATCATCCACATCTCTTCACCATGGCAACAGCAGCATCTCGCCCCACTCTTTACACACCTACAAACAAGAGGAGTGGGAGGGGCCTCTGGACTACACCAAACCCAATCGGCAGAGAGAGGAGGAGCTAGAAGAGATGGACCACAGCGCTCAGTCATTTGCTTCTTCCGACCCTGAGGATTGCGACATGATGCAGGACGTCCTGGAGGACAGGAAGTACCCCGGAGAGGTCACAACCCCCAGCTTTAAGGTCAGGTTCCAGCCCAAGGACACCAAGAAAGAGCTCCTGCTGTGTCCCACTCCAGGCTGTGACGGCAGCGGACACATCACCGGAAACTATGCATCCCATCGCAGCCTTTCTGGGTGTCCTCTTGCTGATAAGAGTCTTCGGTCCCTCATGGCAGCACACACAGCTGAACTCAAATGTCCAACTCCAGGATGTGATGGTTCAGGTCATATCACTGGCAACTACGCGTCTCACAGAAGTTTGTCTGGGTGTCCACGGGCCAAGAAAGGTGGAATAAAAACAACTCCCATCAAGGACGACAAGGAGGACTCCGAGCTCTTAAAGTTCGTACTGCATAGAAAGCCAAAGGCTTTTCCCCATTTCTTTTACGCCACTGTACGATGCCCAGTGCCGGGTTGTGACAGCCTGGGTCACATCAGCGGGAAGTATGCCACTCACCGCAGTGCGTATGGATGCCCGCTGGCGGCCAGGCGGCAGAAAGAGGGTTTGTTGAACGGGTCTCCATTCTCCTGGAAGGCGTTTAAGACAGAAGGCCCCACCTGTCCCACACCAGGATGTGACGGATCAGGACACGCCAACGGCAGCTTCCTCACCCACCGCAGTCTCTCAGGCTGCCCCAGAGCCTCCCTCAACAAGAAGAAAGCCAAGTTCCCTGGAGAAGAGTATCTCAGCACTAAGTTCAGAGCCAGTGACGTCTTAGACAATGACGAAGACATCAAGCAACTCAATAAAGAAATCAATGAGCTCAATGAATCCAACAATGAGATGGAGGCAGATATGGTCAACCTTCAAACACAGATCACATCTATGGAGAAGAACCTGAAGAACATCGAGCAGGAGAATAAGGTGATTGAAGAACAGAACGAAGCGCTGTTTATGGAGCTGTCTGGACTCAGTCAAGCTCTTATACGGAGTCTGGCCAACATTCGCCTGCCTCACATGCAGGAGCCAATCACAGAGCAGAATTTCGAGAGCTACGTGAGCACCCTAACTGACATGTACACCAATAAGGACTGCTACCAGAACCCAGAGAACAAGGCCCTTCTGGAGACCATCAACAAGGCGGTGAAAGGCATCAAGAAAACGAAAGTGGTCATGGGAAATGAGATACAAAGTGAGCGAAATGCGTGTGCAACCATATCAGTGCCATGCGGTTGACTCTGTAAATTCCACTTGTTGAAACACTACTTTCTTTATCTCAGCAGCCATTTTGTTTGTTTGTTTGTTTATTGGTTTGTTTTGTTTTAGAGCGACACACAGGCACATTAGCTTGCTCTCCTTTATTTGTAGTCCTTACACTGTAGGAATATTTACCCAGCGTAGTCATATCTATTACATATGAACAATGAGTTGCACTTCATTTCAGTCCATTCAACATCAGACAAGATGTTGGATTGTCACTGATCTATAAATTATACGAAATTTGTCCAGACTCTACTGTAATTTATTTATATTTTGTTATAATTTAATTTTAACTGTATTATTTATTTGAATTCACCTATTTAAATATTCACAGCCCTTCTGTTTATGAAAATGTGACAAGGAACTTGCCACAACAATATTAGGAAAGAGAGAGAAAAAAAAAAAATGTACCACTAATTTTTATAACTTCTTTTCATTTGATGATAGAGTTTTTAAACATTTTTTAAGTGCAAATATTTTTAACCAACAATGTTTTGATAATTTTGTAATTTTTTTTTCTCTTTCTCTCTACCTGTATATCTATATCTATCTCTAGCTGTCTCTATTTGCATTTGATTTGATTTGATTTTTTCGAATTTCTAACAGCTGAAGGAGAAGTATAATCTCTATTTATTATTTATTTAATATTTATGATGAAATTATGAACTGTGATACGGTTGTAATGTATATTTATTTTGTAACGTCTTCGTGTGTTTGTGAAGTCTTAGTAGTCTTGAAGAACCTTTGGCGATATAAAA

Function

symbol description
myt1b Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within pancreatic A cell development. Predicted to be active in nucleus. Is expressed in brain; central nervous system; ovary; and posterior pancreatic bud. Orthologous to human MYT1 (myelin transcription factor 1).
myt1 Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including diaphragm development; regulation of gene expression; and regulation of insulin secretion involved in cellular response to glucose stimulus. Located in cytosol and nucleoplasm.

GO:

id name namespace
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_04763908_04787185.mRNA True 4126 mRNA 0.48 23 4763908 4787967

Neighbor

gene id symbol gene type direction distance location
CI01000021_04755472_04758504 NA coding upstream 5254 4755472 ~ 4758654 (+)
CI01000021_04614553_04621970 NA coding upstream 141480 4613765 ~ 4622428 (+)
CI01000021_04576127_04585164 NA coding upstream 178597 4576127 ~ 4585311 (+)
CI01000021_04436103_04476829 OPRL1 coding upstream 286597 4435827 ~ 4477311 (+)
CI01000021_04259458_04263656 NA coding upstream 499802 4259157 ~ 4264106 (+)
CI01000021_04795987_04803001 PCMTD2 coding downstream 8020 4795987 ~ 4803104 (+)
CI01000021_04886787_04893309 PLAGL2 coding downstream 98370 4886337 ~ 4893474 (+)
CI01000021_05050240_05098803 NA coding downstream 260953 5048920 ~ 5102550 (+)
CI01000021_05193252_05204766 SLCO4A1 coding downstream 404816 5192783 ~ 5205113 (+)
CI01000021_05244908_05282588 NTSR1 coding downstream 456764 5244731 ~ 5282927 (+)
G118459 NA non-coding upstream 32591 4731100 ~ 4731317 (+)
G118450 NA non-coding upstream 47413 4716292 ~ 4716495 (+)
G118416 NA non-coding upstream 102335 4661338 ~ 4661573 (+)
G118409 NA non-coding upstream 123688 4639927 ~ 4640220 (+)
G118405 NA non-coding upstream 129972 4633502 ~ 4633936 (+)
G118438 NA non-coding downstream 65188 4853155 ~ 4882086 (+)
G118434 NA non-coding downstream 106336 4894303 ~ 4895695 (+)
G118444 NA non-coding downstream 117500 4905467 ~ 4913042 (+)
G118493 NA non-coding downstream 162390 4950357 ~ 4950626 (+)
G118499 NA non-coding downstream 172635 4960602 ~ 4960918 (+)
G117493 NA other upstream 728232 4033000 ~ 4035676 (+)
G117484 NA other upstream 806156 3956146 ~ 3957752 (+)
G117202 NA other upstream 1435675 3269144 ~ 3328233 (+)
G117237 NA other upstream 1520544 3237854 ~ 3243364 (+)
G116236 NA other upstream 2466713 2289817 ~ 2297195 (+)
G119701 NA other downstream 2012177 6800144 ~ 6860606 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00008081 LOC108440949,LOC107690850 coding CM030123.1 CM030123.1 41769950 ~ 41789678 (+)