CI01000021_05050240_05098803


Basic Information

Item Value
gene id CI01000021_05050240_05098803
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5048920 ~ 5102550 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_05050240_05098803.mRNA
CTTTAAAGTTGCATTTGGATGTAGCAGGAGGTGCCAAAAGCTTGGATCACGCCAAACCTCAACGGTTTTTTCGCTCTACTAGAAGGGTGTACGTTGGTGTTCAGCGGTAGTCACTGGAGTCGAGCGTTGAAGGCATTAACATTCTGGTGTGCAGGAGAGCCTCTGAAGGTCTGGTATCAGTCAAGCTGCCCTTTTCAAGCCTGAATGACCGGGCAGTGGCAGAGGAGGCCCCAGGAGAGAGCGGGAGGGACACCCACACACTTTCCTGCGACAGCCCGCAGAAGAGAACAAGTCAATTTAACAGCAATTGTACTAAACTGAGGGCCAGTGATTAATATGTTCATTCATTCTTTGTTTGTATAATGGTTAATTTGCTGTTGTTATTTAGTCAGGCATCAGTCACTCGCCTATAGTTAGGACCCAGAAGGTAAAAGGACCCGGATGTTGACGCAGTTTAGTATTCAGTTATGATCGTCATCATTATTATTACTAGCGCGAGACGAACCTAACGGTGATGATAATGCCAGTTCTGCCGCGATATTGAGTAATCGCATGTGTGCGTGCATCAAAGAGTAAGTTTGTTTGCTTTATTATAGTGTTTACATTTGATTGTCAATTCGTTTTAGAGACGTGCTTATCGCGTCTGCCGAGCGCAAGTGTCTGTAAGCTAATCTCTAGCCAATCTTATTATACGATCGCTGTACAGACATATTTTCAGTGTTAATGTTATAACAAATGCAGATATTATTCATTTGCATATTGATGTTTTATCAGTGTGTGTATTTATACTTTATTGTTGTTTCCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTCCTGAAGCACTGCAGATGCGCTTGAAGGATCTGGAGGAAGAGAACCGTCAGCTCAGACGCAACCTCAGTGAACACTCTGCACCTCACACTCCAAGGTCATTGTCTCCATCTCAACTATTTTGTTCGCCCAGACACTTGACACGCAATATGGAGGATCGAACCTCACCGCCACATCACAGAGTAACGTCAACAAGAGATCAAAGAGATCCACGTTATGAAAGAGAAAGGTCAGTGAAACACAGTGAGGAAAATTTGCACGCAGAACGTCAACGTGACAGAATAGATGAGATCATTCACGAGCTTCAGAGGATGAAAGCAAGTTCCAAGCAAACCAGATCAACTTCGCCTTCGCCAGAGCGTGCAGTAACACCCCAGAGGGCTGAGCGTGCTGATGAACGCTACCAACGCCAAAGCCAGCTATCCACACACTATCACAGCCCTACCTCCAGGCGACAGAGACCATTCGTGCCATATTGTTTCTCATCGCCACCCAGTCAAGAGAACACTTATCGTGGTCCAACCCCTACCATTCCTAACTTCACCAAAGAGGATCCACGGGAGTTCGCCAGGTTAAAATCATACCATGCAGGCTCTAACAGAACTCTATGGGCAACCCCATCAACACTTCAACGCATTGCTGTTCTGATGGAACTACCTCACGATCTTCGAGCAAACTTTAAGAGGTATGTCAATCCACTCAAGACACCTATGCCTACCTTGATTGAATTTGCAGAATGGCTGGAGTATGAGGTGAGGGTGCAAGAGGACGGTACCCAGTTCAGTATTGACTCTGGTAGAGAGAGACAGAGCTTCCGCAAAGACCAGCAAAGGGTGCCAAAATTATCACACAAATCTACTGCCATCTTCCATGGAAGCGAGCAAAGTCCAGTTTCCAAGGCCGAATCGGTTCGCCAGAAAGCAGTGTCTGCGGTGAGATCACTAGAGAAACCAAAGAAATACTGCCCCTTTTGTAATACAACTCAACACTATCTCAATCAGTGTTCAAACTTCAAGCTGCTGACCAAAGAGCAGATCGTGACTTGGATCAGATCCAATCAGAGATGCTGGAAATGTGGGCGTGATCACCAAGCAGGTCAGTGTACTCTTAAGGCGAAATTCAAGAAGTGTCAAATGAGACATCTAGAAATTCTGCATGGGGCCAACAATGAAACGAGTGCTAATGCTACCAAAGAAACAGGAGAGATCACCCAGACCACCAGCACCACAATAGAAACTCTATACGTTGATCGACCAACTGGCAGCAGTAGAGTGTTACTGAAATTGTGCAGAGTCATCATACGCAACGGAGACTTTTCACTGGATACATATGCACTGCTCGATGATGGTTCAGAGCGCACCATACTTCTCCACGAGGCAGCTCAGCAACTCAACCTCCACGGTAAGCCTGAAGACCTGTCTCTTCGCACAGTGCGCCAAGACATCCGCATTATCCATGGCTCCACAGTATCATTCTCAGTGAGTCCCGCTACACAACCAGATCGCAACTTTGCAATCAAGAGAGCCTTCACAACTGAGGAGCTTGGATTAGCACCTCATTCCTACCCAACTGAAACACTCCAAAAGAGATATCGCCATCTCAGAGGCCTACCTCTTCAGTCAATTGAACATGCGAGGCCATTATTGCTCATTGGGTCAGATTACCCACAAGTGATCACCCCCGTTGAGCCAGTTCGGTTGGGACCCCCCGGAGGTCCAGCAGCTGTGAAAACTCGTCTGGGATGGACACTCCAAGGTCCATCAAAGTTCCTCGAACACATCCCACACACACAACAGTGCTTGTTCACAACTGTAAGCCTTGCGCCTAATGATCTGTTCAGTCAAGTTGAGCGGTTGTGGCAGATGGACATCTTGCCCTACCAAAATGAACGGCTTGTGACAAGGTCAAAGCAAGATGCAGAAGCTATGCGCATGTTGGAGGAGAAAACAATAAGGGTTGAAGTTGAAGGTGTGCAAAGATACGCTACCCCCCTCCTGTGGAAAACCAGTCCTCCACCTCAAGCCGCTCCAAAGGAAGCAGTACTGCCTCATTTGCAAAGGACTGATAATCAGCTGGCACAGAGCTCTGAGAAATCCCAAGTGTACAAGTCTGAGATGAACAAGCTGCTAAACGCAGGCTATGTGAGAAAAATTCCCCAATCCACAGCTGTACAGACTCCAGGGTGGTACATTCCACACCACATGGTCCACCACAACGGAAAGCACAGGATTGTATTCAATTGTTCTTTCAACTTCCAAGGGCTGAGCTTGAATGAATATCTACTTCCTGGGCCAACTCTGGGTACGACCTTGCTGGGAGTACTTCTCCATTTCCGAGAGTATGCAGTAGCCATTAGTAGCGACATAAAGGGGATGTTTCATCAGTGTTACCATTTGGCACCACGTGCAGCCCGTGCTGTGCAACCTTTGCTCTTCGGAAACATGTTGCTGATCACAGCCAACCAGACTGAGGCACGAGCATCAATAGATCGTTGTTTCTATGTGGACAACTGGTTGCAAAGTGTTCCCTCTCTTGAGACTGCCAGACAATTAGTGGATGACATGCAACATCTGCTGGCCGAGGGTGGTTTTGAACTGCGCCAATGGGCTAGTAACACACCCCAACTGCTACAACACCTGCTGCAGCAAATCAGGTCAGAGAACCATGAGCTTTGGTTTAGTTCAGACAGAGCCGACCCCCAGGAGCGCACACTAGGACTTAGGTGGCAGTGTAGATCCGACACCCTTAGTTATAAACATGGCCATATCGTAAAAACTGAGCCCACTATGCGACGCATATATAGCATCCTTTCCAGTCAGTACGATCCATTGGGATTCATCATCCCATTTACCATTAGAGCTAAGATCATAGTCCAGAGGCTCTGGGACAAAAAAAGAGAATGGGATGACCCTGAACTGCCCACAGACCTCAAGAATGCATGGCTCACATGGGAAGATGAGCTTCCACAACTTTCCTGTGTCACACTGCCCAGATGCTACACTACAAAGGTAGATCCCTTGATCAGCTCAAGAAGTGTGCACACATTCTGTGATGCCTCAGAGCGAGCGTACGGTGCTGTAGCCTATCTCCGCACTGAAGATAGCAAAGGACAAATAGAGGTGTCATTCTTGGCAGCTAGATCACGAGTAGCTCCAAAGAAGCAGCAAACAATTCCCCGACTTGAGCTATGCGCTGCTCTAACTGGAGCACAATTGGCAGCAGTTCTGCAAAGAGAGCTCTCACTGGACATCAGCAGTTTCAGATACTGGACTGATTCTACAACCGTTCTCAACTGGCTTCAATCAGACTCATGCCACTTTAAAGTGTTTGTAGGAACTAGAGTTGCAGAGATTCAAGAACTAACTGATTCACGATCATGGTCCTACGTGCACTCACAAGACAACCCTGCTGACGATATTACACGTGGCATGTCACTGGCTCAGCTAGCCGAACCTACCCGCTGGAAGAACGGCCCAGAATTTCTGCAGAAACCTCCATCATCTTGGCCCAAACTGCCCAACCTAGTGCCAACCGACACTTCAAAGGAACTGCGTAAACCAGTATCTTTCCATCTTCTAATAACCAAGGATGACCAGCATTCAGTCAATGCATCTCAATATGACAATTTTCAACAGCTTGTAGACTCAACAGCCAGAACCCTTCATGGGGCGGCCAGTCCCACAGACACTGTCACTGCTGACACATATAAGAAAGCCGAGCTCAGAATCATCCAACAGTCTCAGATGGATAGTTTTCCTGACGAATATGCTCAGCTTCAAGCGGGGAAACCCATCTCCTCAAACAGTCGTCTACAGACATTAGCTCCCGAATTTGATTCTGACACGCAGCTAATTAGAGTGGGTGGACGACTCCGAAGATGTCACTTCCTGAGCCCTGACATTCTTCACCCAATTGTCCTAGACCCAATCCACCCAGTGACTAAGCTACTAATTCGGCAGTATGACGCACAGCTCCATCACCCTGGTACTGAAAGGGTCTTTGCTGAAATCAGAAGACGCTTCTGGATCTTGAGAGGTCGTCAAGCTATTCGATCAATTCAACATCATTGTACTGAGTGTCAAAGGTGGCGTGGCAAGCCCAACATACCTAGAATGGCAGACTTGCCCCCTTCTAGTCTGAGACTCTTCCAGCCAGCCTTTTACTCCACAGGCATGGACTGCTTCGGGCCATTTACCATCAAAATTGGGCGCCGGAATGAAAAACGCTGGGGTATCATTTATAAATGTTTGACCACGAAGGCAGTGTACATCGACCTTCTCTCTCAAGCCGACACAGACTCTTTCCTTATGTCTCTACGCCGATTCATCGCCCGTAGGGGAAAGCCTCATGAGTTGTGCTCTGATCAGGGTACCAATTTCAAAGGTGGAGATCGTGAGCTTAAGGAAGCCTTCAACAACATTCACCCTCAATTGCAAAGAGAACTTGCAAAGCAACAGATTGACTTTCAGTACAATCCACCAAACTCCCCACATTTCGGAGGATCCTGGGAAAGAGAAATCAAATCTGTTAAAGCTGCACTATACACCATCATTGGTGCGCAAACTGTCACAGAGGAAGTGCTCAGGACTGTTCTTATTGAAATTGAGGGAATTTTGAATTCAAAGCCATTGGGATATGTATCCTCGGATGTAGCTGATCCTGACCCAATAACCCCTAATTCACTCTTAATGGGTCGACCAGACTCTGCCCTGCCTCAGGTAATTTACCCTGCATCTGACCTGCTCAGCCGCAAGCGCTGGAGACACAGCCAGATACTGGCAGATCAGTTCTGGAGCTGTTATCTGCGCAACTACCTGCCTGGACTCCAGTCTCGCCATAAGTGGCAACAAGAGAAAGACAACCTGACAGTAGGGACAGTGGTTATGATTGCTGATCCGCAATTCCCCAGAGCACTCTGGCCCATTGGGACAGTGAAAGCTGTCCAGACCGGAGCTGATAATAAACCCAGAAAAGGGAAGAGAACAGCAGCCATTGCTACGCACATAGATACAACCATTTGCTTGTATCTATGGACAGCGTCACTCTTCGTGCCGTGCAGTTGGAGGAAAGAAAAGTGTGCAGGTGGGACAGAAAATCCACATAAACTCAGTGTATTCACACTGTCAATACACATTAGAGAAATAATCAAAACAAGAACAACACTGCTCTTCTGCTTTACGGGCACAATAACATTCCATATTAAAAGATTTTTAAAAATCAATGGAGTTATGCAGGGAATCATATCCAAATGGATTTTGAAATTAATATCGGAGAGCTTAATTTCTTTTCATGAAGTGGACTATCTTCTCTCCATTGCCAATCTAGAGACAGAAATAGTCCACAAGAAATGTAAGGGAGACAATAAATGTGTCAAAAACAGCAGTAACAGAGAATTGCTGCATGTGTTGAGTTACCAGAGGGAACAGAAGTCTGCTGAAACCTTCGGGAAAGGAGAAGCCCTGGCTGTCACACTGAATTATCGTCTGATCAAAACAAATAGACCCAAAATCCCCAAACACACACACAGAGATGCACGTGCACGAAAAAATGTGGTGTGTACAAGACTGCTGGTGCTGGAGCCAATGGCCAGTCTGGAACCATTTTCCACCATAGAAAAAGTCACCTGTTTAAAAGACATGCGTACACACGTACAATCATACATACACAAGTGTCAGCTGGAGCTTGTATTCACATGCAACAAGCTACAATACAAGCATGTCACAGAGTCATACAGAGAAAATAAGGGACACTCCATTCCTTTACACCACATGTATAATTCAAGATTGACTCTGACCATAGATAGCAGAGTGCACAGAGTTGCCGAACTACTGGGTGGTGCAGGTGACGTGGACTTGTATCGGACGGTGACGTCATTTTTGCCCTTAATGGCTGCCGTTTCTCATGTGAAAGGACAAGGACGTATATTGGACAAAGTATGGACAGAATTGTCTGGCAGGATGGAATATACATCTATCTCTCATTTAAAAGTGTCAGCATACTGTCCATACTTTCTCCTACTCCTGTTTCAGCCGATACTGGGGCGTAGTTCTATACGTAGCTCTTTTTCTCTCTCAGGACAGCCTGTCTGCGTCTCTGCATTTCTATTGATATATCAGCGTGTGCATGAGGATGAAAGGGGAACAATCATAGGCGGCATGTGCAGCCATCCGGCTCCTGTCAAAGTAGTTTTAGCAGCAGAGTTAGCATGCAAAGCTAGCAACTCCTTACTGCATCACACTGAGAGCTGCGACCTTAGCAAATTCGTTCTTCATTTAATGACTTAAACTGAACTGTTCGAGTAATTTTTACACTCTATCTTTTTGCATTTCTTTCTTGAGAAGACTTTTAAAAAGTACACTGTAGCGCATCCACCACTGCTGGCCCCTGACACTGATATTTAGCCGTGTGGTGGTCCAGGGAGATGCTTACTTTTCTTTTTCTAATTTTACTTTGATGGCTCGAGGACAGGCATTAGCCCCTGGGCTGTCAGTCATGTTTAAATGTGGAGCGGACAGGAGCTGGGATAGATCAGGTGACATCAGGATGGCAGCAGCTGTTGCTGGTGGTCAGAGCCTTGTGAAGCACTGGATGTTCGGTTAGACGCAGGAATGGTACACCTGCTTCTGTGTATGTGTGTTGATTGGCGTACGAGCCTATTTCCTGGTAATGCTGCTATCTCTGGCGTTGAGCTGCTGGGGCAACGACTTGTATGAGGAGACGGCCATGACTGTGTGTTGGTGTGGGGTCATAGGGGTCGATTTACAAAAACCACAGTCTGATATCCTATAAGGAAGGGATGATGACAGAGGTGGGTGAAAACAGGAGGAGTGGGTTTGATTTATGATGAGGACTTTTAGTTTAATTACTCAGAGAGCAGTGCTGATGCAGAAAGAAGATCTACGATTTACTTAGCTATTAGCAGTTAGCATCCGATGGCTGCCTCTGGCAATGAGCTGTTAATGCACCCAGATAGAAAATGAATTTCTAAACAAACGGTTTACTAAATTGTAATTGTCTAAGTGCATTACCAAGACTTTGTTACTTATGTTGCCCAATTTTTAAAGTCTTTCTAACAGTCTAAATTAAATTAAATTTAAAACAACAATTGTTCTAAAACTAAACCAATTACTACATTTTAATTGTCTAAAAATGTATTATCTCCTATTAATCACATTTTCACAATTGTTTAATTGTCTAAAATGAAATTCAATGGAATGTTATTTGAACTGTGCCTAATGTATAAGAGCAAATGCTCTAAACTAATTCATATTCAATGTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_05050240_05098803.mRNA False 8583 mRNA 0.43 11 5048920 5099799

Neighbor

gene id symbol gene type direction distance location
CI01000021_04886787_04893309 PLAGL2 coding upstream 155446 4886337 ~ 4893474 (+)
CI01000021_04795987_04803001 PCMTD2 coding upstream 245816 4795987 ~ 4803104 (+)
CI01000021_04763908_04787185 MYT1B, MYT1 coding upstream 260953 4763908 ~ 4787967 (+)
CI01000021_04755472_04758504 NA coding upstream 290266 4755472 ~ 4758654 (+)
CI01000021_04614553_04621970 NA coding upstream 426492 4613765 ~ 4622428 (+)
CI01000021_05193252_05204766 SLCO4A1 coding downstream 92984 5192783 ~ 5205113 (+)
CI01000021_05244908_05282588 NTSR1 coding downstream 144932 5244731 ~ 5282927 (+)
CI01000021_05302737_05307812 NA coding downstream 202544 5302343 ~ 5308673 (+)
CI01000021_05392788_05403219 NA coding downstream 292503 5392302 ~ 5404100 (+)
CI01000021_05451019_05481032 NA coding downstream 351220 5451019 ~ 5481196 (+)
G118520 NA non-coding upstream 60183 4988263 ~ 4988737 (+)
G118519 NA non-coding upstream 60952 4987650 ~ 4987968 (+)
G118516 NA non-coding upstream 69173 4979487 ~ 4979747 (+)
G118512 NA non-coding upstream 75363 4973335 ~ 4973557 (+)
G118506 NA non-coding upstream 83254 4965415 ~ 4965666 (+)
G118793 NA non-coding downstream 49535 5149334 ~ 5149685 (+)
G118798 NA non-coding downstream 53381 5153180 ~ 5153522 (+)
G118807 NA non-coding downstream 61288 5161087 ~ 5165347 (+)
G118891 NA non-coding downstream 188698 5288497 ~ 5288747 (+)
G118905 NA non-coding downstream 206155 5305954 ~ 5306248 (+)
G117493 NA other upstream 1013244 4033000 ~ 4035676 (+)
G117484 NA other upstream 1091168 3956146 ~ 3957752 (+)
G117202 NA other upstream 1720687 3269144 ~ 3328233 (+)
G117237 NA other upstream 1805556 3237854 ~ 3243364 (+)
G119701 NA other downstream 1700345 6800144 ~ 6860606 (+)

Expression


Co-expression Network