G118409


Basic Information

Item Value
gene id G118409
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 4639927 ~ 4640220 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU134518
AAAACTACTTTTTCTAAAATTTTTGAAAAAAAAAAAGCTTAATTTGAGATTGGGCGGAAGTTACTCAACAGCGTAGGATCCAGATTTGGTATGGTCGGGTATGGTCCCAGAGTGAAGACATTTGTTGATGATAGACAACAAATCAGGACCGATGGCTTGAAAAACTTGCTTAAGAAAATGTGTGGGAATCACATCCTGAGGGCAACTAGTAGGTTTTAAAGTTGCAACAGTCTCATTAAGGAAGTCCAAAGAGATAGGCTCAAAGACAGACCATGTAGAGGAGGAGACAGGGAC

Function

NR:

description
PREDICTED: nuclear receptor ROR-beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134518 True 294 lncRNA 0.40 1 4639927 4640220

Neighbor

gene id symbol gene type direction distance location
CI01000021_04614553_04621970 NA coding upstream 17499 4613765 ~ 4622428 (+)
CI01000021_04576127_04585164 NA coding upstream 54616 4576127 ~ 4585311 (+)
CI01000021_04436103_04476829 OPRL1 coding upstream 162616 4435827 ~ 4477311 (+)
CI01000021_04259458_04263656 NA coding upstream 375821 4259157 ~ 4264106 (+)
CI01000021_04219242_04237829 NA coding upstream 401920 4219187 ~ 4238007 (+)
CI01000021_04755472_04758504 NA coding downstream 115252 4755472 ~ 4758654 (+)
CI01000021_04763908_04787185 MYT1B, MYT1 coding downstream 123688 4763908 ~ 4787967 (+)
CI01000021_04795987_04803001 PCMTD2 coding downstream 155767 4795987 ~ 4803104 (+)
CI01000021_04886787_04893309 PLAGL2 coding downstream 246117 4886337 ~ 4893474 (+)
CI01000021_05050240_05098803 NA coding downstream 408700 5048920 ~ 5102550 (+)
G118405 NA non-coding upstream 5991 4633502 ~ 4633936 (+)
G118374 NA non-coding upstream 41168 4598548 ~ 4598759 (+)
G117644 NA non-coding upstream 169022 4406964 ~ 4470905 (+)
G117641 NA non-coding upstream 238429 4401285 ~ 4401498 (+)
G117638 NA non-coding upstream 246148 4393448 ~ 4393779 (+)
G118416 NA non-coding downstream 21118 4661338 ~ 4661573 (+)
G118450 NA non-coding downstream 76072 4716292 ~ 4716495 (+)
G118459 NA non-coding downstream 90880 4731100 ~ 4731317 (+)
G118438 NA non-coding downstream 212935 4853155 ~ 4882086 (+)
G118434 NA non-coding downstream 254083 4894303 ~ 4895695 (+)
G117493 NA other upstream 604251 4033000 ~ 4035676 (+)
G117484 NA other upstream 682175 3956146 ~ 3957752 (+)
G117202 NA other upstream 1311694 3269144 ~ 3328233 (+)
G117237 NA other upstream 1396563 3237854 ~ 3243364 (+)
G116236 NA other upstream 2342732 2289817 ~ 2297195 (+)
G119701 NA other downstream 2159924 6800144 ~ 6860606 (+)

Expression


Co-expression Network