CI01000026_01341481_01348949


Basic Information

Item Value
gene id CI01000026_01341481_01348949
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1341133 ~ 1348949 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_01341481_01348949.mRNA
CCATGCCATCAGTGATGGAGCGATCAGGGTCTGGTGTGCTGTCCCGAAGCAGGGCCAAAACAGTCACGAACGGGAACAGCCAGCACTCTGAGGAAGAGAGCAGCGATGAGGAACACACACATGACAGTATGATCCGCGTTGGTGGGGACTACCAGGCACAGATCCCAGAGTTCAAACCAGTGGATGAATATATACTGATGGCCAAAGAGAAGCACGGATACAACATGGAACAGGCTCTTGGCATGCTTCTGTGGCACAAGCATGATGTGGAGAAGTCACTGGCTGACCTGGCTAACTTCACTCCCTTTCCTGATGAGTGGACCGTGGAAGACAAAGTTCTGTTCGAACAGGCTTTCAGCTTTCATGGCAAGAGCTTCCATCGCATCCAACAGATGGTGAGCGGGAGGGATGGAGGCAAGATGGGTTATATAAGAGTCATCTGCTGCTCTCACATCTGCCTGCAACTACAGAAGAGCAGACATCTTGAGATATGGCCCAATGTAGAATCACACATCCATCTTCCAGACAAGCTGATCTCAAGCCTGGTGAAGTACTATTACTCCTGGAAGAAAACCAGAACCCGAACAAGCGTCATGGACCGCCAAGCACGCAAACTCCTCAGCAAGAGAGAAAAGGATGAGAGTAATGATGAGATAGAAGAAGGAGATCCAGGCAGTGACAGTGACTTTGAGATCAACGCCAAGAAAGAGGCAACAAAGCAGAACTCTGGAAATGGAGGAGGGAGTGATAAAGCTTCAAGCAAATCTGGTCCGACTCGGAAAGAGAACCAGGGTGCGCAGTACCGACACCACCCTCTTCGTGCTCGCCGTAGGCCTCCTAAAGGCATGCACCTGGAACAGGAGGACATCGTCGCCCTCTCGGCATCCACTGATTCAGGAGCTGTTACTATCAGACAGCTGGACACACAACTAGTGTCACTTAAGAGACAGGTCCAAAGTATCAAGCAAACCAACAGCGTTCTCAAGCACAACTTGGGTGATGGAATTGAAGGCATGAGACCATCAGAGCCCACTCAAAAAATCAACACTCGTTGGACGACGGAGGAGCAGCTCCTCGCTGTTCAAGCTATTAGGCGATACGGTAAAGACTTTGCAGCCATAGCGGACGTGATTGGCAACAAGACGGTAGCGCAGGTCAGCTCGTTCTTCGTCAGCTACCGGAGACGCTTCAATCTTGAGGAGGTGCTACGTGAATGGCAGGCAGAACAGGAAGTGGTGCAAGGGAGCAGCGGGAGGACTGTGAACATGGAGCTCAACGGGTCGGCAGGAGCAGAAGATGATGAGACCCGCGGTGGCATCCTCGCTCCACCAGGGGGCACTGAGGAACTCTCTAAGTTCCTCCTCTGCCTCTGCTGGACAGCTGCCGCCCTCACTGGTGGGGCTGAAGCTGCACATCACCTGCTGGTGTGCATGACTACAGGCACTGCCGAGTGTTCTGAAGTACACCTGGTGTCAGGAAACTGGGAAATTGTGTATACTCACTCTCCCATTGAAGAGCCATGTTGATAGAATCATCCTGGGTGAAGCGTTTTTTGTCGTTTGTATAATTAGGTCTTTGAGATATTGTTAGGTAGTGAATTTATGTAGTACTAGTTAATATTGACTAAGCACTAAGTGATGCAAAATACTTGATTTTTTTGTTTTGTTTTGTTGCAACTCTGAAATACACTGATTTCATCTCGCTCTTAAAGGCACAAACACAGAAGCATTAAAACACTAAAGATGATTCCCGAGGAAGCTCGTGCAAGAGTTCTCGTTTCTTCCAAAATGTTGTATGTATGTGAGAACTGTTTACAAATGAACTGCATTTGCTTGTGGCGGAATATTTTTGTTTTAGATTTTTTTCAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_01341481_01348949.mRNA True 1874 mRNA 0.49 12 1341133 1348949

Neighbor

gene id symbol gene type direction distance location
CI01000026_01263538_01270706 ADAD2 coding downstream 70427 1263484 ~ 1270706 (-)
CI01000026_01241505_01244833 NA coding downstream 96300 1241505 ~ 1244833 (-)
CI01000026_01234036_01241404 NA coding downstream 99729 1233603 ~ 1241404 (-)
CI01000026_01228438_01233086 NA coding downstream 108047 1228312 ~ 1233086 (-)
CI01000026_01220096_01224123 NA coding downstream 115174 1220096 ~ 1225959 (-)
CI01000026_01384408_01386103 ARL2 coding upstream 35415 1384364 ~ 1386103 (-)
CI01000026_01433833_01436599 GPHA2 coding upstream 84871 1433820 ~ 1436599 (-)
CI01000026_01452548_01454060 NA coding upstream 102890 1451839 ~ 1454060 (-)
CI01000026_01660894_01664126 NA coding upstream 311562 1660511 ~ 1665349 (-)
CI01000026_01855346_01933699 DYSF coding upstream 505735 1854684 ~ 1933699 (-)
G127240 NA non-coding downstream 78729 1262190 ~ 1262404 (-)
G127174 NA non-coding downstream 314975 1018851 ~ 1026158 (-)
G127171 NA non-coding downstream 346354 994521 ~ 994779 (-)
G127152 NA non-coding downstream 394303 942761 ~ 946830 (-)
G127144 NA non-coding downstream 410414 930394 ~ 930719 (-)
G127275 NA non-coding upstream 39030 1387979 ~ 1388196 (-)
G127278 NA non-coding upstream 44458 1393407 ~ 1393608 (-)
G127279 NA non-coding upstream 50357 1399306 ~ 1400928 (-)
G127282 NA non-coding upstream 59981 1408930 ~ 1410546 (-)
G127294 NA non-coding upstream 122734 1471683 ~ 1519199 (-)
CI01000026_00986386_01002180 NA other downstream 338544 986182 ~ 1002180 (-)
G127418 NA other upstream 386828 1735777 ~ 1736220 (-)
CI01000026_03439507_03490314 PDE3B other upstream 2031836 3438795 ~ 3490503 (-)
G129476 NA other upstream 2321625 3670574 ~ 3670884 (-)
G129658 NA other upstream 3018347 4367296 ~ 4373069 (-)
G129750 NA other upstream 3464101 4785885 ~ 4820249 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00015366 NA coding CM030132.1 CM030132.1 8413410 ~ 8417776 (-)